Difference between revisions of "SJ01145"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ15444 == * transcription-direction: ** negative * right-end-position: ** 285189 * left-end-position: ** 273359 * centisome-position: ** 92.48161...")
(Created page with "Category:gene == Gene SJ13641 == * transcription-direction: ** negative * right-end-position: ** 199266 * left-end-position: ** 181632 * centisome-position: ** 54.706455...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ15444 ==
+
== Gene SJ13641 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 285189
+
** 199266
 
* left-end-position:
 
* left-end-position:
−
** 273359
+
** 181632
 
* centisome-position:
 
* centisome-position:
−
** 92.48161    
+
** 54.706455    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[325-BISPHOSPHATE-NUCLEOTIDASE-RXN]]
+
* [[2.1.1.79-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
+
* [[RXN-7421]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[R163-RXN]]
+
* [[RXN1G-2544]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-10949]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-10952]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-10953]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-10954]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-7253]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN0-5408]]
+
* [[RXN1G-3641]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
Line 53: Line 35:
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-2301]]
+
* [[PWY0-541]]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-6363]]
+
* [[PWY-4942]]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-4702]]
+
* [[PWYG-321]]
−
** '''3''' reactions found over '''14''' reactions in the full pathway
+
** '''26''' reactions found over '''205''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=285189}}
+
{{#set: right-end-position=199266}}
−
{{#set: left-end-position=273359}}
+
{{#set: left-end-position=181632}}
−
{{#set: centisome-position=92.48161   }}
+
{{#set: centisome-position=54.706455   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=10}}
+
{{#set: nb reaction associated=4}}
 
{{#set: nb pathway associated=3}}
 
{{#set: nb pathway associated=3}}

Revision as of 08:21, 15 March 2021

Gene SJ13641

  • transcription-direction:
    • negative
  • right-end-position:
    • 199266
  • left-end-position:
    • 181632
  • centisome-position:
    • 54.706455

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY0-541
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-4942
    • 1 reactions found over 2 reactions in the full pathway
  • PWYG-321
    • 26 reactions found over 205 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ01145&oldid=122404"