Difference between revisions of "SJ01156"

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(Created page with "Category:gene == Gene SJ19404 == * transcription-direction: ** negative * right-end-position: ** 545830 * left-end-position: ** 517973 * centisome-position: ** 81.70269...")
 
(Created page with "Category:gene == Gene SJ03174 == * transcription-direction: ** negative * right-end-position: ** 37192 * left-end-position: ** 27897 * centisome-position: ** 22.453398...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ19404 ==
+
== Gene SJ03174 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 545830
+
** 37192
 
* left-end-position:
 
* left-end-position:
−
** 517973
+
** 27897
 
* centisome-position:
 
* centisome-position:
−
** 81.70269    
+
** 22.453398    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[2.4.1.119-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[3.1.1.64-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[CARBOXYLESTERASE-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-16761]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[ISOLEUCINE--TRNA-LIGASE-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10711]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10767]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12252]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12575]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXNQT-4366]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]]
+
* [[TRNA-CHARGING-PWY]]
−
** '''16''' reactions found over '''19''' reactions in the full pathway
+
** '''21''' reactions found over '''21''' reactions in the full pathway
 +
* [[PWY-6303]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6857]]
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=545830}}
+
{{#set: right-end-position=37192}}
−
{{#set: left-end-position=517973}}
+
{{#set: left-end-position=27897}}
−
{{#set: centisome-position=81.70269   }}
+
{{#set: centisome-position=22.453398   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=9}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=3}}

Revision as of 14:20, 26 August 2019

Gene SJ03174

  • transcription-direction:
    • negative
  • right-end-position:
    • 37192
  • left-end-position:
    • 27897
  • centisome-position:
    • 22.453398

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • TRNA-CHARGING-PWY
    • 21 reactions found over 21 reactions in the full pathway
  • PWY-6303
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6857
    • 3 reactions found over 7 reactions in the full pathway




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