Difference between revisions of "SJ01171"

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(Created page with "Category:gene == Gene SJ05770 == * transcription-direction: ** positive * right-end-position: ** 197949 * left-end-position: ** 180522 * centisome-position: ** 37.026737...")
(Created page with "Category:gene == Gene SJ07771 == * transcription-direction: ** negative * right-end-position: ** 35115 * left-end-position: ** 30809 * centisome-position: ** 49.728027...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ05770 ==
+
== Gene SJ07771 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 197949
+
** 35115
 
* left-end-position:
 
* left-end-position:
−
** 180522
+
** 30809
 
* centisome-position:
 
* centisome-position:
−
** 37.026737    
+
** 49.728027    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[FUMHYDR-RXN]]
+
* [[2.4.1.68-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7426]]
−
* [[PWY-5690]]
+
** '''4''' reactions found over '''10''' reactions in the full pathway
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
{{#set: transcription-direction=negative}}
−
* [[P108-PWY]]
+
{{#set: right-end-position=35115}}
−
** '''2''' reactions found over '''7''' reactions in the full pathway
+
{{#set: left-end-position=30809}}
−
* [[P105-PWY]]
+
{{#set: centisome-position=49.728027   }}
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[TCA]]
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[REDCITCYC]]
 
−
** '''5''' reactions found over '''9''' reactions in the full pathway
 
−
* [[P42-PWY]]
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY66-398]]
 
−
** '''10''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-7254]]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-6969]]
 
−
** '''10''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-5913]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-561]]
 
−
** '''6''' reactions found over '''4''' reactions in the full pathway
 
−
* [[FERMENTATION-PWY]]
 
−
** '''11''' reactions found over '''16''' reactions in the full pathway
 
−
* [[P23-PWY]]
 
−
** '''9''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-7384]]
 
−
** '''6''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-6728]]
 
−
** '''11''' reactions found over '''19''' reactions in the full pathway
 
−
* [[PWY-5392]]
 
−
** '''6''' reactions found over '''12''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=197949}}
 
−
{{#set: left-end-position=180522}}
 
−
{{#set: centisome-position=37.026737   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=1}}
 
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=16}}
+
{{#set: nb pathway associated=1}}

Revision as of 08:20, 15 March 2021

Gene SJ07771

  • transcription-direction:
    • negative
  • right-end-position:
    • 35115
  • left-end-position:
    • 30809
  • centisome-position:
    • 49.728027

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7426
    • 4 reactions found over 10 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ01171&oldid=122042"