Difference between revisions of "SJ01249"

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(Created page with "Category:gene == Gene SJ16423 == * transcription-direction: ** negative * right-end-position: ** 380320 * left-end-position: ** 370176 * centisome-position: ** 53.82116...")
(Created page with "Category:gene == Gene SJ00484 == * transcription-direction: ** positive * right-end-position: ** 97905 * left-end-position: ** 80034 * centisome-position: ** 48.075397...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ16423 ==
+
== Gene SJ00484 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 380320
+
** 97905
 
* left-end-position:
 
* left-end-position:
−
** 370176
+
** 80034
 
* centisome-position:
 
* centisome-position:
−
** 53.82116    
+
** 48.075397    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
−
* [[3.1.1.64-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[3.1.1.73-RXN]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN0-5055]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[CARBOXYLESTERASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-10711]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-10767]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12252]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12575]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXNQT-4366]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6784]]
+
* [[PWY-7388]]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''7''' reactions found over '''11''' reactions in the full pathway
−
* [[PWY-6303]]
+
* [[PWY-6679]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''1''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-6857]]
+
* [[PWY-5744]]
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''4''' reactions found over '''13''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[PWY-5743]]
−
{{#set: right-end-position=380320}}
+
** '''5''' reactions found over '''13''' reactions in the full pathway
−
{{#set: left-end-position=370176}}
+
* [[PWY-5789]]
−
{{#set: centisome-position=53.82116   }}
+
** '''8''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY0-1264]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6722]]
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-4381]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=97905}}
 +
{{#set: left-end-position=80034}}
 +
{{#set: centisome-position=48.075397   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=9}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=8}}

Revision as of 11:09, 15 January 2021

Gene SJ00484

  • transcription-direction:
    • positive
  • right-end-position:
    • 97905
  • left-end-position:
    • 80034
  • centisome-position:
    • 48.075397

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7388
    • 7 reactions found over 11 reactions in the full pathway
  • PWY-6679
    • 1 reactions found over 9 reactions in the full pathway
  • PWY-5744
    • 4 reactions found over 13 reactions in the full pathway
  • PWY-5743
    • 5 reactions found over 13 reactions in the full pathway
  • PWY-5789
    • 8 reactions found over 18 reactions in the full pathway
  • PWY0-1264
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6722
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-4381
    • 3 reactions found over 3 reactions in the full pathway




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