Difference between revisions of "SJ01330"

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(Created page with "Category:gene == Gene SJ08500 == * transcription-direction: ** negative * right-end-position: ** 39447 * left-end-position: ** 32222 * centisome-position: ** 7.3477635...")
 
(Created page with "Category:gene == Gene SJ16882 == * transcription-direction: ** positive * right-end-position: ** 241752 * left-end-position: ** 234335 * centisome-position: ** 84.99514...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ08500 ==
+
== Gene SJ16882 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 39447
+
** 241752
 
* left-end-position:
 
* left-end-position:
−
** 32222
+
** 234335
 
* centisome-position:
 
* centisome-position:
−
** 7.3477635    
+
** 84.99514    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PEROXID-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[GSHTRAN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-14240]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[GST-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-15288]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[PROSTAGLANDIN-D-SYNTHASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-17352]]
+
* [[RXN-13673]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-8635]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-15680]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7214]]
+
* [[PWY-6842]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''5''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7445]]
+
* [[PWY-4061]]
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''4''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-5466]]
+
* [[PWY66-374]]
−
** '''2''' reactions found over '''10''' reactions in the full pathway
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-6824]]
+
* [[PWY-7112]]
−
** '''2''' reactions found over '''10''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-5469]]
+
* [[PWY-7533]]
−
** '''2''' reactions found over '''8''' reactions in the full pathway
+
** '''3''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-5461]]
+
{{#set: transcription-direction=positive}}
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
{{#set: right-end-position=241752}}
−
{{#set: transcription-direction=negative}}
+
{{#set: left-end-position=234335}}
−
{{#set: right-end-position=39447}}
+
{{#set: centisome-position=84.99514   }}
−
{{#set: left-end-position=32222}}
 
−
{{#set: centisome-position=7.3477635   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=5}}
 
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=5}}

Revision as of 14:20, 26 August 2019

Gene SJ16882

  • transcription-direction:
    • positive
  • right-end-position:
    • 241752
  • left-end-position:
    • 234335
  • centisome-position:
    • 84.99514

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6842
    • 5 reactions found over 9 reactions in the full pathway
  • PWY-4061
    • 4 reactions found over 8 reactions in the full pathway
  • PWY66-374
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-7112
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7533
    • 3 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ01330&oldid=16465"