Difference between revisions of "SJ01379"

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(Created page with "Category:gene == Gene SJ06121 == * transcription-direction: ** positive * right-end-position: ** 116824 * left-end-position: ** 80027 * centisome-position: ** 16.628712...")
(Created page with "Category:gene == Gene SJ12026 == * transcription-direction: ** positive * right-end-position: ** 309926 * left-end-position: ** 293325 * centisome-position: ** 80.97778...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ06121 ==
+
== Gene SJ12026 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 116824
+
** 309926
 
* left-end-position:
 
* left-end-position:
−
** 80027
+
** 293325
 
* centisome-position:
 
* centisome-position:
−
** 16.628712    
+
** 80.97778    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[BETA-UREIDOPROPIONASE-RXN]]
+
* [[1TRANSKETO-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[N-CARBAMOYLPUTRESCINE-AMIDASE-RXN]]
+
* [[2TRANSKETO-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-11210]]
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
** Category: [[orthology]]
 
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-3982]]
+
* [[P124-PWY]]
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''12''' reactions found over '''15''' reactions in the full pathway
−
* [[PWY-43]]
+
* [[CALVIN-PWY]]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''12''' reactions found over '''13''' reactions in the full pathway
−
* [[ARGDEG-III-PWY]]
+
* [[P185-PWY]]
 +
** '''11''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-1861]]
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[P21-PWY]]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6430]]
+
* [[NONOXIPENT-PWY]]
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5723]]
 +
** '''10''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-6901]]
 +
** '''10''' reactions found over '''8''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=116824}}
+
{{#set: right-end-position=309926}}
−
{{#set: left-end-position=80027}}
+
{{#set: left-end-position=293325}}
−
{{#set: centisome-position=16.628712   }}
+
{{#set: centisome-position=80.97778   }}
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=8}}

Revision as of 14:52, 5 January 2021

Gene SJ12026

  • transcription-direction:
    • positive
  • right-end-position:
    • 309926
  • left-end-position:
    • 293325
  • centisome-position:
    • 80.97778

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • P124-PWY
    • 12 reactions found over 15 reactions in the full pathway
  • CALVIN-PWY
    • 12 reactions found over 13 reactions in the full pathway
  • P185-PWY
    • 11 reactions found over 12 reactions in the full pathway
  • PWY-1861
    • 7 reactions found over 9 reactions in the full pathway
  • P21-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • NONOXIPENT-PWY
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-5723
    • 10 reactions found over 10 reactions in the full pathway
  • PWY-6901
    • 10 reactions found over 8 reactions in the full pathway




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