Difference between revisions of "SJ01379"
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(Created page with "Category:gene == Gene SJ00763 == * transcription-direction: ** positive * right-end-position: ** 69469 * left-end-position: ** 61615 * centisome-position: ** 38.04851...") |
(Created page with "Category:gene == Gene SJ07541 == * transcription-direction: ** positive * right-end-position: ** 6540 * left-end-position: ** 4044 * centisome-position: ** 0.89073515...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ07541 == |
* transcription-direction: | * transcription-direction: | ||
** positive | ** positive | ||
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 6540 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 4044 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 0.89073515 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[PORPHOBILSYNTH-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | == Pathway(s) associated == | ||
| + | * [[PWY-5188]] | ||
| + | ** '''6''' reactions found over '''6''' reactions in the full pathway | ||
| + | * [[PWY-5189]] | ||
| + | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
{{#set: transcription-direction=positive}} | {{#set: transcription-direction=positive}} | ||
| − | {{#set: right-end-position= | + | {{#set: right-end-position=6540}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=4044}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=0.89073515 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
{{#set: nb reaction associated=1}} | {{#set: nb reaction associated=1}} | ||
| + | {{#set: nb pathway associated=2}} | ||
Revision as of 18:51, 14 January 2021
Contents
Gene SJ07541
- transcription-direction:
- positive
- right-end-position:
- 6540
- left-end-position:
- 4044
- centisome-position:
- 0.89073515
Organism(s) associated with this gene
Reaction(s) associated
- PORPHOBILSYNTH-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-5188
- 6 reactions found over 6 reactions in the full pathway
- PWY-5189
- 3 reactions found over 4 reactions in the full pathway
