Difference between revisions of "SJ01407"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DGTP DGTP] == * common-name: ** dgtp * smiles: ** c(op(=o)([o-])op(=o)(op([o-])([o-])=o)[o-])c1...")
(Created page with "Category:gene == Gene SJ01407 == * transcription-direction: ** positive * right-end-position: ** 22422 * left-end-position: ** 8741 * centisome-position: ** 1.5825942...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DGTP DGTP] ==
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== Gene SJ01407 ==
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* common-name:
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* transcription-direction:
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** dgtp
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** positive
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* smiles:
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* right-end-position:
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** c(op(=o)([o-])op(=o)(op([o-])([o-])=o)[o-])c1(oc(cc(o)1)n3(c=nc2(c(=o)nc(n)=nc=23)))
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** 22422
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* inchi-key:
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* left-end-position:
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** haazlughyhwqiw-kvqbguixsa-j
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** 8741
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* molecular-weight:
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* centisome-position:
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** 503.152
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** 1.5825942   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[DGTCY]]
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* [[S.japonica_carotenoid_curated]]
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* [[DGTD]]
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== Reaction(s) associated ==
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* [[DGTPTRIPHYDRO-RXN]]
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* [[ATPASE-RXN]]
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* [[DGTPtm]]
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** Category: [[annotation]]
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* [[DGTUP]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-14208]]
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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* [[RXN-14217]]
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** Category: [[annotation]]
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* [[RXN0-385]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Reaction(s) known to produce the compound ==
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* [[RXN-12195]]
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* [[ATDGD]]
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** Category: [[annotation]]
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* [[DGDPKIN-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[DGTPtm]]
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* [[RXN-12196]]
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* [[RXN-14207]]
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** Category: [[annotation]]
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* [[RXN0-746]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Reaction(s) of unknown directionality ==
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* [[RXN0-5462]]
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{{#set: common-name=dgtp}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=haazlughyhwqiw-kvqbguixsa-j}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=503.152}}
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== Pathway(s) associated ==
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* [[PWY-6545]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7210]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7198]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7184]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=22422}}
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{{#set: left-end-position=8741}}
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{{#set: centisome-position=1.5825942    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=5}}
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{{#set: nb pathway associated=4}}

Latest revision as of 11:01, 18 March 2021

Gene SJ01407

  • transcription-direction:
    • positive
  • right-end-position:
    • 22422
  • left-end-position:
    • 8741
  • centisome-position:
    • 1.5825942

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ01407&oldid=132011"