Difference between revisions of "SJ01407"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=D-galactopyranose D-galactopyranose] == * common-name: ** d-galactopyranose == Reaction(s) know...")
(Created page with "Category:gene == Gene SJ01407 == * transcription-direction: ** positive * right-end-position: ** 22422 * left-end-position: ** 8741 * centisome-position: ** 1.5825942...")
 
(7 intermediate revisions by 3 users not shown)
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[[Category:metabolite]]
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[[Category:gene]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=D-galactopyranose D-galactopyranose] ==
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== Gene SJ01407 ==
* common-name:
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* transcription-direction:
** d-galactopyranose
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** positive
== Reaction(s) known to consume the compound ==
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* right-end-position:
* [[RXN-12078]]
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** 22422
* [[TRANS-RXN-21]]
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* left-end-position:
== Reaction(s) known to produce the compound ==
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** 8741
* [[3.2.1.23-RXN]]
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* centisome-position:
* [[ALPHAGALACTOSID-RXN]]
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** 1.5825942   
* [[RXN-12078]]
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== Organism(s) associated with this gene  ==
* [[RXN-12398]]
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* [[S.japonica_carotenoid_curated]]
* [[RXN-12399]]
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== Reaction(s) associated ==
* [[RXN-12400]]
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* [[ATPASE-RXN]]
* [[RXN-17830]]
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** Category: [[annotation]]
* [[TRANS-RXN-21]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
== Reaction(s) of unknown directionality ==
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
{{#set: common-name=d-galactopyranose}}
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12195]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12196]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-5462]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-6545]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7210]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7198]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7184]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
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{{#set: right-end-position=22422}}
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{{#set: left-end-position=8741}}
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{{#set: centisome-position=1.5825942    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=5}}
 +
{{#set: nb pathway associated=4}}

Latest revision as of 11:01, 18 March 2021

Gene SJ01407

  • transcription-direction:
    • positive
  • right-end-position:
    • 22422
  • left-end-position:
    • 8741
  • centisome-position:
    • 1.5825942

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway