Difference between revisions of "SJ01422"

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(Created page with "Category:gene == Gene SJ18142 == * transcription-direction: ** negative * right-end-position: ** 58790 * left-end-position: ** 47111 * centisome-position: ** 18.707907...")
(Created page with "Category:gene == Gene SJ14528 == * transcription-direction: ** positive * right-end-position: ** 436505 * left-end-position: ** 415962 * centisome-position: ** 58.36941...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ18142 ==
+
== Gene SJ14528 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 58790
+
** 436505
 
* left-end-position:
 
* left-end-position:
−
** 47111
+
** 415962
 
* centisome-position:
 
* centisome-position:
−
** 18.707907    
+
** 58.36941    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[CARBODEHYDRAT-RXN]]
+
* [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN0-5224]]
+
* [[ACOACXr]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[BIOTIN-CARBOXYL-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5055]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
Line 24: Line 31:
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6142]]
+
* [[PWY-7388]]
−
** '''10''' reactions found over '''13''' reactions in the full pathway
+
** '''7''' reactions found over '''11''' reactions in the full pathway
−
* [[PWY-7115]]
+
* [[PWY-6679]]
−
** '''9''' reactions found over '''10''' reactions in the full pathway
+
** '''1''' reactions found over '''9''' reactions in the full pathway
−
* [[PWYQT-4429]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[CYANCAT-PWY]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
 
* [[PWY-5744]]
 
* [[PWY-5744]]
 
** '''4''' reactions found over '''13''' reactions in the full pathway
 
** '''4''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-5743]]
 +
** '''5''' reactions found over '''13''' reactions in the full pathway
 
* [[PWY-5789]]
 
* [[PWY-5789]]
 
** '''8''' reactions found over '''18''' reactions in the full pathway
 
** '''8''' reactions found over '''18''' reactions in the full pathway
−
* [[PWY-7117]]
+
* [[PWY0-1264]]
−
** '''10''' reactions found over '''12''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-5743]]
+
* [[PWY-6722]]
−
** '''5''' reactions found over '''13''' reactions in the full pathway
+
** '''1''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-241]]
+
* [[PWY-4381]]
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=58790}}
+
{{#set: right-end-position=436505}}
−
{{#set: left-end-position=47111}}
+
{{#set: left-end-position=415962}}
−
{{#set: centisome-position=18.707907   }}
+
{{#set: centisome-position=58.36941   }}
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
+
{{#set: organism associated=S.japonica_sterols_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=4}}
−
{{#set: nb pathway associated=9}}
+
{{#set: nb pathway associated=8}}

Revision as of 20:29, 18 December 2020

Gene SJ14528

  • transcription-direction:
    • positive
  • right-end-position:
    • 436505
  • left-end-position:
    • 415962
  • centisome-position:
    • 58.36941

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7388
    • 7 reactions found over 11 reactions in the full pathway
  • PWY-6679
    • 1 reactions found over 9 reactions in the full pathway
  • PWY-5744
    • 4 reactions found over 13 reactions in the full pathway
  • PWY-5743
    • 5 reactions found over 13 reactions in the full pathway
  • PWY-5789
    • 8 reactions found over 18 reactions in the full pathway
  • PWY0-1264
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6722
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-4381
    • 3 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ01422&oldid=45136"