Difference between revisions of "SJ01423"

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(Created page with "Category:gene == Gene SJ10618 == * transcription-direction: ** positive * right-end-position: ** 28903 * left-end-position: ** 13287 * centisome-position: ** 3.4322958...")
(Created page with "Category:gene == Gene SJ01423 == * transcription-direction: ** negative * right-end-position: ** 143935 * left-end-position: ** 103917 * centisome-position: ** 68.47908...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ10618 ==
+
== Gene SJ01423 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 28903
+
** 143935
 
* left-end-position:
 
* left-end-position:
−
** 13287
+
** 103917
 
* centisome-position:
 
* centisome-position:
−
** 3.4322958    
+
** 68.47908    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ATPASE-RXN]]
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[ACID-PHOSPHATASE-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12195]]
+
* [[ALKAPHOSPHA-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12196]]
+
* [[RXN-5822]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN0-5462]]
+
* [[RXN-8748]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6545]]
+
* [[PWY-6348]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-7210]]
+
* [[NADPHOS-DEPHOS-PWY]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7198]]
+
* [[PWY-5083]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''5''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-7184]]
+
* [[NAD-BIOSYNTHESIS-II]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''4''' reactions found over '''3''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-5491]]
−
{{#set: right-end-position=28903}}
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
{{#set: left-end-position=13287}}
+
{{#set: transcription-direction=negative}}
−
{{#set: centisome-position=3.4322958   }}
+
{{#set: right-end-position=143935}}
 +
{{#set: left-end-position=103917}}
 +
{{#set: centisome-position=68.47908   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=5}}
 
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=5}}

Latest revision as of 11:07, 18 March 2021

Gene SJ01423

  • transcription-direction:
    • negative
  • right-end-position:
    • 143935
  • left-end-position:
    • 103917
  • centisome-position:
    • 68.47908

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6348
    • 1 reactions found over 1 reactions in the full pathway
  • NADPHOS-DEPHOS-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5083
    • 5 reactions found over 6 reactions in the full pathway
  • NAD-BIOSYNTHESIS-II
    • 4 reactions found over 3 reactions in the full pathway
  • PWY-5491
    • 1 reactions found over 2 reactions in the full pathway




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