Difference between revisions of "SJ01518"

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(Created page with "Category:gene == Gene SJ18200 == * transcription-direction: ** negative * right-end-position: ** 249623 * left-end-position: ** 215052 * centisome-position: ** 85.64533...")
(Created page with "Category:gene == Gene SJ01518 == * transcription-direction: ** positive * right-end-position: ** 117169 * left-end-position: ** 109536 * centisome-position: ** 72.85594...")
 
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ18200 ==
+
== Gene SJ01518 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 249623
+
** 117169
 
* left-end-position:
 
* left-end-position:
** 215052
+
** 109536
 
* centisome-position:
 
* centisome-position:
** 85.64533    
+
** 72.85594    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[PHEAMINOTRANS-RXN]]
+
* [[1.14.13.8-RXN]]
** Category: [[orthology]]
+
** Category: [[annotation]]
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[SUCCINYLDIAMINOPIMTRANS-RXN]]
+
* [[RXN66-81]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY-7432]]
+
* [[PWY66-201]]
** '''3''' reactions found over '''2''' reactions in the full pathway
+
** '''3''' reactions found over '''16''' reactions in the full pathway
* [[PWY-5079]]
+
{{#set: transcription-direction=positive}}
** '''2''' reactions found over '''4''' reactions in the full pathway
+
{{#set: right-end-position=117169}}
* [[ANAPHENOXI-PWY]]
+
{{#set: left-end-position=109536}}
** '''1''' reactions found over '''3''' reactions in the full pathway
+
{{#set: centisome-position=72.85594   }}
* [[PHESYN]]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
* [[DAPLYSINESYN-PWY]]
 
** '''7''' reactions found over '''9''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=249623}}
 
{{#set: left-end-position=215052}}
 
{{#set: centisome-position=85.64533   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=2}}
 
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=1}}

Latest revision as of 11:00, 18 March 2021

Gene SJ01518

  • transcription-direction:
    • positive
  • right-end-position:
    • 117169
  • left-end-position:
    • 109536
  • centisome-position:
    • 72.85594

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY66-201
    • 3 reactions found over 16 reactions in the full pathway