Difference between revisions of "SJ01579"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ18449 == * transcription-direction: ** negative * right-end-position: ** 352470 * left-end-position: ** 344988 * centisome-position: ** 53.214664...")
 
(Created page with "Category:gene == Gene SJ13978 == * transcription-direction: ** negative * right-end-position: ** 701973 * left-end-position: ** 693897 * centisome-position: ** 95.56823...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
== Gene SJ18449 ==
+
== Gene SJ13978 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
** 352470
+
** 701973
 
* left-end-position:
 
* left-end-position:
** 344988
+
** 693897
 
* centisome-position:
 
* centisome-position:
** 53.214664    
+
** 95.56823    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[1.2.4.4-RXN]]
+
* [[GSAAMINOTRANS-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[2KETO-3METHYLVALERATE-RXN]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
* [[KETOISOCAPROATE-RXN]]
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[METHYLVALERATE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY-5046]]
+
* [[PWY-5188]]
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''6''' reactions found over '''6''' reactions in the full pathway
* [[PWY-5108]]
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
* [[ILEUDEG-PWY]]
 
** '''5''' reactions found over '''6''' reactions in the full pathway
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
{{#set: right-end-position=352470}}
+
{{#set: right-end-position=701973}}
{{#set: left-end-position=344988}}
+
{{#set: left-end-position=693897}}
{{#set: centisome-position=53.214664   }}
+
{{#set: centisome-position=95.56823   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=1}}

Revision as of 14:22, 26 August 2019

Gene SJ13978

  • transcription-direction:
    • negative
  • right-end-position:
    • 701973
  • left-end-position:
    • 693897
  • centisome-position:
    • 95.56823

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5188
    • 6 reactions found over 6 reactions in the full pathway