Difference between revisions of "SJ01582"

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(Created page with "Category:gene == Gene SJ14677 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == <div class="toccolours mw-co...")
(Created page with "Category:gene == Gene SJ16589 == * transcription-direction: ** negative * right-end-position: ** 184902 * left-end-position: ** 175608 * centisome-position: ** 25.695286...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ14677 ==
+
== Gene SJ16589 ==
 +
* transcription-direction:
 +
** negative
 +
* right-end-position:
 +
** 184902
 +
* left-end-position:
 +
** 175608
 +
* centisome-position:
 +
** 25.695286   
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[PROTEIN-KINASE-RXN]]
* [[NARINGENIN-3-DIOXYGENASE-RXN]]
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** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8443]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[RXN-527]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN-602]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN-7648]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN-7775]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN-7922]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN-8450]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN1F-162]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN1F-163]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN1F-165]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN1F-167]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN1F-168]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN1F-93]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-5381]]
* [[PWY1F-FLAVSYN]]
+
** '''6''' reactions found over '''11''' reactions in the full pathway
** '''5''' reactions found over '''5''' reactions in the full pathway
+
{{#set: transcription-direction=negative}}
* [[PWY-6787]]
+
{{#set: right-end-position=184902}}
** '''6''' reactions found over '''10''' reactions in the full pathway
+
{{#set: left-end-position=175608}}
* [[PWY-5390]]
+
{{#set: centisome-position=25.695286    }}
** '''2''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-3101]]
 
** '''4''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-5059]]
 
** '''3''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY1F-823]]
 
** '''3''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-5152]]
 
** '''2''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-5391]]
 
** '''1''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-5070]]
 
** '''3''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-5035]]
 
** '''2''' reactions found over '''7''' reactions in the full pathway
 
</div>
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=13}}
+
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=10}}
+
{{#set: nb pathway associated=1}}

Revision as of 18:42, 14 January 2021

Gene SJ16589

  • transcription-direction:
    • negative
  • right-end-position:
    • 184902
  • left-end-position:
    • 175608
  • centisome-position:
    • 25.695286

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5381
    • 6 reactions found over 11 reactions in the full pathway