Difference between revisions of "SJ01631"

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(Created page with "Category:gene == Gene SJ19088 == * transcription-direction: ** positive * right-end-position: ** 206262 * left-end-position: ** 192051 * centisome-position: ** 16.834515...")
(Created page with "Category:gene == Gene SJ01631 == * transcription-direction: ** negative * right-end-position: ** 23838 * left-end-position: ** 23200 * centisome-position: ** 15.771048...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ19088 ==
+
== Gene SJ01631 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 206262
+
** 23838
 
* left-end-position:
 
* left-end-position:
−
** 192051
+
** 23200
 
* centisome-position:
 
* centisome-position:
−
** 16.834515    
+
** 15.771048    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[APAPT]]
+
* [[RNA-DIRECTED-DNA-POLYMERASE-RXN]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN0-5217]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[SPERMIDINESYN-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
{{#set: transcription-direction=negative}}
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
{{#set: right-end-position=23838}}
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
{{#set: left-end-position=23200}}
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
{{#set: centisome-position=15.771048   }}
−
* [[SPERMINE-SYNTHASE-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
== Pathway(s) associated ==
 
−
* [[PWY0-1303]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[BSUBPOLYAMSYN-PWY]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[ARGSPECAT-PWY]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[POLYAMINSYN3-PWY]]
 
−
** '''4''' reactions found over '''1''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=206262}}
 
−
{{#set: left-end-position=192051}}
 
−
{{#set: centisome-position=16.834515   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=4}}
 

Latest revision as of 11:07, 18 March 2021

Gene SJ01631

  • transcription-direction:
    • negative
  • right-end-position:
    • 23838
  • left-end-position:
    • 23200
  • centisome-position:
    • 15.771048

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ01631&oldid=135136"