Difference between revisions of "SJ01675"

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(Created page with "Category:gene == Gene SJ09475 == * transcription-direction: ** positive * right-end-position: ** 34938 * left-end-position: ** 17492 * centisome-position: ** 43.00113...")
(Created page with "Category:gene == Gene SJ01675 == * transcription-direction: ** negative * right-end-position: ** 125317 * left-end-position: ** 112874 * centisome-position: ** 76.9536...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ09475 ==
+
== Gene SJ01675 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 34938
+
** 125317
 
* left-end-position:
 
* left-end-position:
−
** 17492
+
** 112874
 
* centisome-position:
 
* centisome-position:
−
** 43.00113    
+
** 76.9536    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN]]
+
* [[2.7.10.1-RXN]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[ORNITHINE--OXO-ACID-AMINOTRANSFERASE-RXN]]
+
* [[2.7.11.25-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[PROTEIN-KINASE-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[ORNITHINE-GLU-AMINOTRANSFERASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
== Pathway(s) associated ==
+
{{#set: transcription-direction=negative}}
−
* [[GLYSYN-ALA-PWY]]
+
{{#set: right-end-position=125317}}
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
{{#set: left-end-position=112874}}
−
* [[PWY-6922]]
+
{{#set: centisome-position=76.9536   }}
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
−
* [[ARGININE-SYN4-PWY]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-3341]]
 
−
** '''4''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6344]]
 
−
** '''2''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-4981]]
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
−
* [[ARG-PRO-PWY]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[CITRULBIO-PWY]]
 
−
** '''7''' reactions found over '''8''' reactions in the full pathway
 
−
* [[ARGASEDEG-PWY]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=34938}}
 
−
{{#set: left-end-position=17492}}
 
−
{{#set: centisome-position=43.00113   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=3}}
 
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=9}}
 

Latest revision as of 11:06, 18 March 2021

Gene SJ01675

  • transcription-direction:
    • negative
  • right-end-position:
    • 125317
  • left-end-position:
    • 112874
  • centisome-position:
    • 76.9536

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ01675&oldid=134523"