Difference between revisions of "SJ01690"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CH3-MALONATE-S-ALD CH3-MALONATE-S-ALD] == * common-name: ** (s)-methylmalonate-semialdehyde * s...")
(Created page with "Category:gene == Gene SJ08123 == * transcription-direction: ** positive * right-end-position: ** 52004 * left-end-position: ** 43180 * centisome-position: ** 9.700188...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CH3-MALONATE-S-ALD CH3-MALONATE-S-ALD] ==
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== Gene SJ08123 ==
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* common-name:
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* transcription-direction:
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** (s)-methylmalonate-semialdehyde
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** positive
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* smiles:
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* right-end-position:
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** cc([ch]=o)c(=o)[o-]
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** 52004
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* inchi-key:
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* left-end-position:
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** vokumxabrrxhar-vkhmyheasa-m
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** 43180
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* molecular-weight:
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* centisome-position:
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** 101.082
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** 9.700188   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-11213]]
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* [[S.japonica_sterols_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN]]
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* [[PMPOXI-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=(s)-methylmalonate-semialdehyde}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=vokumxabrrxhar-vkhmyheasa-m}}
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** Category: [[orthology]]
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{{#set: molecular-weight=101.082}}
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[PNPOXI-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[PYRIDOXINE-4-OXIDASE-RXN]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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== Pathway(s) associated ==
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* [[PLPSAL-PWY]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7204]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PYRIDOXSYN-PWY]]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7282]]
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** '''6''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-5499]]
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** '''1''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=52004}}
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{{#set: left-end-position=43180}}
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{{#set: centisome-position=9.700188    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=3}}
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{{#set: nb pathway associated=5}}

Revision as of 20:22, 18 December 2020

Gene SJ08123

  • transcription-direction:
    • positive
  • right-end-position:
    • 52004
  • left-end-position:
    • 43180
  • centisome-position:
    • 9.700188

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PLPSAL-PWY
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7204
    • 9 reactions found over 9 reactions in the full pathway
  • PYRIDOXSYN-PWY
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-7282
    • 6 reactions found over 10 reactions in the full pathway
  • PWY-5499
    • 1 reactions found over 9 reactions in the full pathway




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