Difference between revisions of "SJ01769"

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(Created page with "Category:gene == Gene SJ14111 == * transcription-direction: ** positive * right-end-position: ** 52702 * left-end-position: ** 39016 * centisome-position: ** 11.999164...")
(Created page with "Category:gene == Gene SJ05251 == * transcription-direction: ** negative * right-end-position: ** 304186 * left-end-position: ** 294677 * centisome-position: ** 59.076946...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ14111 ==
+
== Gene SJ05251 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 52702
+
** 304186
 
* left-end-position:
 
* left-end-position:
−
** 39016
+
** 294677
 
* centisome-position:
 
* centisome-position:
−
** 11.999164    
+
** 59.076946    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ATPASE-RXN]]
+
* [[GAPDH_]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
* [[GAPOXNPHOSPHN-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12195]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12196]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-5462]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7210]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
* [[GLUCONEO-PWY]]
−
* [[PWY-7198]]
+
** '''12''' reactions found over '''13''' reactions in the full pathway
 +
* [[P124-PWY]]
 +
** '''12''' reactions found over '''15''' reactions in the full pathway
 +
* [[P185-PWY]]
 +
** '''11''' reactions found over '''12''' reactions in the full pathway
 +
* [[P122-PWY]]
 +
** '''16''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY-5484]]
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-1042]]
 +
** '''9''' reactions found over '''10''' reactions in the full pathway
 +
* [[GLYCOLYSIS]]
 +
** '''11''' reactions found over '''12''' reactions in the full pathway
 +
* [[ANAGLYCOLYSIS-PWY]]
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
* [[SUCSYN-PWY]]
 
** '''6''' reactions found over '''7''' reactions in the full pathway
 
** '''6''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-7184]]
+
* [[PWY66-399]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''11''' reactions found over '''12''' reactions in the full pathway
−
* [[PWY-6545]]
+
* [[PWY-6901]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''10''' reactions found over '''8''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-7003]]
−
{{#set: right-end-position=52702}}
+
** '''8''' reactions found over '''6''' reactions in the full pathway
−
{{#set: left-end-position=39016}}
+
</div>
−
{{#set: centisome-position=11.999164   }}
+
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=304186}}
 +
{{#set: left-end-position=294677}}
 +
{{#set: centisome-position=59.076946   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=12}}

Revision as of 12:59, 14 January 2021

Gene SJ05251

  • transcription-direction:
    • negative
  • right-end-position:
    • 304186
  • left-end-position:
    • 294677
  • centisome-position:
    • 59.076946

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • GLUCONEO-PWY
    • 12 reactions found over 13 reactions in the full pathway
  • P124-PWY
    • 12 reactions found over 15 reactions in the full pathway
  • P185-PWY
    • 11 reactions found over 12 reactions in the full pathway
  • P122-PWY
    • 16 reactions found over 18 reactions in the full pathway
  • PWY-5484
    • 10 reactions found over 11 reactions in the full pathway
  • PWY-1042
    • 9 reactions found over 10 reactions in the full pathway
  • GLYCOLYSIS
    • 11 reactions found over 12 reactions in the full pathway
  • ANAGLYCOLYSIS-PWY
    • 10 reactions found over 11 reactions in the full pathway
  • SUCSYN-PWY
    • 6 reactions found over 7 reactions in the full pathway
  • PWY66-399
    • 11 reactions found over 12 reactions in the full pathway
  • PWY-6901
    • 10 reactions found over 8 reactions in the full pathway
  • PWY-7003
    • 8 reactions found over 6 reactions in the full pathway




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