Difference between revisions of "SJ01775"

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(Created page with "Category:gene == Gene SJ12405 == * transcription-direction: ** negative * right-end-position: ** 215448 * left-end-position: ** 205069 * centisome-position: ** 57.246822...")
(Created page with "Category:gene == Gene SJ01775 == * transcription-direction: ** positive * right-end-position: ** 80114 * left-end-position: ** 46089 * centisome-position: ** 31.588146...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ12405 ==
+
== Gene SJ01775 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 215448
+
** 80114
 
* left-end-position:
 
* left-end-position:
−
** 205069
+
** 46089
 
* centisome-position:
 
* centisome-position:
−
** 57.246822    
+
** 31.588146    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ARGDECARBOX-RXN]]
+
* [[ATPASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12195]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12196]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[GLUTDECARBOX-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-6545]]
−
* [[PWY-6305]]
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
** '''4''' reactions found over '''n.a''' reactions in the full pathway
+
* [[PWY-7210]]
−
* [[PWY0-1299]]
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
* [[PWY-7198]]
−
* [[PWY-40]]
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
* [[PWY-7184]]
−
* [[PWY-6834]]
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
{{#set: transcription-direction=positive}}
−
* [[ARGDEG-III-PWY]]
+
{{#set: right-end-position=80114}}
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
{{#set: left-end-position=46089}}
−
* [[PWY0-823]]
+
{{#set: centisome-position=31.588146   }}
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
* [[PWY-43]]
+
{{#set: nb reaction associated=5}}
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
{{#set: nb pathway associated=4}}
−
* [[PWY0-1305]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[GLUDEG-I-PWY]]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-4321]]
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=215448}}
 
−
{{#set: left-end-position=205069}}
 
−
{{#set: centisome-position=57.246822   }}
 
−
{{#set: organism associated=S.japonica_sterols_curated}}
 
−
{{#set: nb reaction associated=2}}
 
−
{{#set: nb pathway associated=10}}
 

Latest revision as of 11:08, 18 March 2021

Gene SJ01775

  • transcription-direction:
    • positive
  • right-end-position:
    • 80114
  • left-end-position:
    • 46089
  • centisome-position:
    • 31.588146

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ01775&oldid=135218"