Difference between revisions of "SJ01800"

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(Created page with "Category:gene == Gene SJ19426 == * transcription-direction: ** negative * right-end-position: ** 55697 * left-end-position: ** 50829 * centisome-position: ** 22.364437...")
 
(Created page with "Category:gene == Gene SJ05841 == * transcription-direction: ** positive * right-end-position: ** 20960 * left-end-position: ** 15837 * centisome-position: ** 18.112263...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ19426 ==
+
== Gene SJ05841 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 55697
+
** 20960
 
* left-end-position:
 
* left-end-position:
−
** 50829
+
** 15837
 
* centisome-position:
 
* centisome-position:
−
** 22.364437    
+
** 18.112263    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[ARYL-SULFOTRANSFERASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[GLYCEROL-1-PHOSPHATASE-RXN]]
+
* [[RXN-10614]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RIBOFLAVINKIN-RXN]]
+
* [[RXN-10615]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-14964]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-14965]]
+
* [[RXN-10777]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-15703]]
+
* [[RXN-10782]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-11058]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-11059]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15587]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15588]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15589]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN6666-9]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[RIBOSYN2-PWY]]
+
* [[PWY-6261]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''10''' reactions found over '''15''' reactions in the full pathway
−
* [[PWY66-366]]
+
* [[PWY-6313]]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-7863]]
+
* [[PWY-6398]]
−
** '''1''' reactions found over '''7''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-5523]]
+
* [[PWY6666-2]]
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-6168]]
+
{{#set: transcription-direction=positive}}
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
{{#set: right-end-position=20960}}
−
* [[PWY-7385]]
+
{{#set: left-end-position=15837}}
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
{{#set: centisome-position=18.112263   }}
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=55697}}
 
−
{{#set: left-end-position=50829}}
 
−
{{#set: centisome-position=22.364437   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=11}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=4}}

Revision as of 14:22, 26 August 2019

Gene SJ05841

  • transcription-direction:
    • positive
  • right-end-position:
    • 20960
  • left-end-position:
    • 15837
  • centisome-position:
    • 18.112263

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6261
    • 10 reactions found over 15 reactions in the full pathway
  • PWY-6313
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-6398
    • 5 reactions found over 5 reactions in the full pathway
  • PWY6666-2
    • 3 reactions found over 5 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ01800&oldid=18101"