Difference between revisions of "SJ01853"

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(Created page with "Category:gene == Gene SJ06297 == * transcription-direction: ** positive * right-end-position: ** 361387 * left-end-position: ** 345946 * centisome-position: ** 72.19451...")
(Created page with "Category:gene == Gene SJ15062 == * transcription-direction: ** positive * right-end-position: ** 67825 * left-end-position: ** 54639 * centisome-position: ** 18.02066...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ06297 ==
+
== Gene SJ15062 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 361387
+
** 67825
 
* left-end-position:
 
* left-end-position:
−
** 345946
+
** 54639
 
* centisome-position:
 
* centisome-position:
−
** 72.19451    
+
** 18.02066    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN3O-328]]
+
* [[6PGLUCONDEHYDROG-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[SPHINGOSINE-N-ACYLTRANSFERASE-RXN]]
+
* [[PYRROLINECARBREDUCT-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-9952]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN66-546]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[SPHINGOLIPID-SYN-PWY]]
+
* [[P122-PWY]]
−
** '''4''' reactions found over '''11''' reactions in the full pathway
+
** '''16''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY-3341]]
 +
** '''4''' reactions found over '''3''' reactions in the full pathway
 +
* [[PROSYN-PWY]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6344]]
 +
** '''2''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-4981]]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[ARG-PRO-PWY]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[OXIDATIVEPENT-PWY]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=361387}}
+
{{#set: right-end-position=67825}}
−
{{#set: left-end-position=345946}}
+
{{#set: left-end-position=54639}}
−
{{#set: centisome-position=72.19451   }}
+
{{#set: centisome-position=18.02066   }}
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=4}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=7}}

Revision as of 14:46, 5 January 2021

Gene SJ15062

  • transcription-direction:
    • positive
  • right-end-position:
    • 67825
  • left-end-position:
    • 54639
  • centisome-position:
    • 18.02066

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • P122-PWY
    • 16 reactions found over 18 reactions in the full pathway
  • PWY-3341
    • 4 reactions found over 3 reactions in the full pathway
  • PROSYN-PWY
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6344
    • 2 reactions found over 9 reactions in the full pathway
  • PWY-4981
    • 3 reactions found over 6 reactions in the full pathway
  • ARG-PRO-PWY
    • 3 reactions found over 4 reactions in the full pathway
  • OXIDATIVEPENT-PWY
    • 3 reactions found over 3 reactions in the full pathway




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