Difference between revisions of "SJ01897"

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(Created page with "Category:gene == Gene SJ00800 == * transcription-direction: ** negative * right-end-position: ** 157112 * left-end-position: ** 147025 * centisome-position: ** 91.09581...")
 
(Created page with "Category:gene == Gene SJ12870 == * transcription-direction: ** positive * right-end-position: ** 293758 * left-end-position: ** 273230 * centisome-position: ** 78.04074...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ00800 ==
+
== Gene SJ12870 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 157112
+
** 293758
 
* left-end-position:
 
* left-end-position:
−
** 147025
+
** 273230
 
* centisome-position:
 
* centisome-position:
−
** 91.09581    
+
** 78.04074    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PEROXID-RXN]]
+
* [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[BIOTIN-CARBOXYL-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-14240]]
+
* [[DALADALALIG-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-15288]]
+
* [[PROPIONYL-COA-CARBOXY-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-17352]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[RXN1G-4355]]
−
* [[RXN-8635]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7214]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
* [[PWY-7388]]
−
* [[PWY-7445]]
+
** '''7''' reactions found over '''9''' reactions in the full pathway
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
* [[PWY-6679]]
−
* [[PWY-5466]]
+
** '''1''' reactions found over '''9''' reactions in the full pathway
−
** '''2''' reactions found over '''10''' reactions in the full pathway
+
* [[PWY-5744]]
−
* [[PWY-6824]]
+
** '''4''' reactions found over '''13''' reactions in the full pathway
−
** '''2''' reactions found over '''10''' reactions in the full pathway
+
* [[PWY-5743]]
−
* [[PWY-5469]]
+
** '''5''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-5789]]
 +
** '''8''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY0-1264]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7953]]
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-6386]]
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-6387]]
 
** '''2''' reactions found over '''8''' reactions in the full pathway
 
** '''2''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-5461]]
+
* [[PROPIONMET-PWY]]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[PWY-6728]]
−
{{#set: right-end-position=157112}}
+
** '''11''' reactions found over '''19''' reactions in the full pathway
−
{{#set: left-end-position=147025}}
+
* [[PWY-7384]]
−
{{#set: centisome-position=91.09581   }}
+
** '''6''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWYG-321]]
 +
** '''26''' reactions found over '''182''' reactions in the full pathway
 +
</div>
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=293758}}
 +
{{#set: left-end-position=273230}}
 +
{{#set: centisome-position=78.04074   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=5}}
 
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=13}}

Revision as of 14:22, 26 August 2019

Gene SJ12870

  • transcription-direction:
    • positive
  • right-end-position:
    • 293758
  • left-end-position:
    • 273230
  • centisome-position:
    • 78.04074

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7388
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-6679
    • 1 reactions found over 9 reactions in the full pathway
  • PWY-5744
    • 4 reactions found over 13 reactions in the full pathway
  • PWY-5743
    • 5 reactions found over 13 reactions in the full pathway
  • PWY-5789
    • 8 reactions found over 18 reactions in the full pathway
  • PWY0-1264
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7953
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-6386
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-6387
    • 2 reactions found over 8 reactions in the full pathway
  • PROPIONMET-PWY
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6728
    • 11 reactions found over 19 reactions in the full pathway
  • PWY-7384
    • 6 reactions found over 10 reactions in the full pathway
  • PWYG-321
    • 26 reactions found over 182 reactions in the full pathway




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