Difference between revisions of "SJ02004"

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(Created page with "Category:gene == Gene SJ10681 == * transcription-direction: ** positive * right-end-position: ** 455954 * left-end-position: ** 445107 * centisome-position: ** 56.47835...")
(Created page with "Category:gene == Gene SJ1973 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * RXN-7978 ** Category: [...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ10681 ==
+
== Gene SJ1973 ==
* transcription-direction:
 
** positive
 
* right-end-position:
 
** 455954
 
* left-end-position:
 
** 445107
 
* centisome-position:
 
** 56.47835   
 
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[3.1.6.12-RXN]]
+
* [[RXN-7978]]
** Category: [[annotation]]
+
** Category: [[manual]]
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[sjap]]; tool: [[unknown-tool]]; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
* [[ARYLSULFAT-RXN]]
+
* [[RXN-7979]]
** Category: [[annotation]]
+
** Category: [[manual]]
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[sjap]]; tool: [[unknown-tool]]; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
** Category: [[orthology]]
+
== Pathway(s) associated ==
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* [[PWY-5945]]
{{#set: transcription-direction=positive}}
+
** '''4''' reactions found over '''4''' reactions in the full pathway
{{#set: right-end-position=455954}}
+
* [[PWY-5174]]
{{#set: left-end-position=445107}}
+
** '''1''' reactions found over '''3''' reactions in the full pathway
{{#set: centisome-position=56.47835    }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=2}}
 
{{#set: nb reaction associated=2}}
 +
{{#set: nb pathway associated=2}}

Revision as of 08:18, 15 March 2021

Gene SJ1973

Organism(s) associated with this gene

Reaction(s) associated

  • RXN-7978
    • Category: manual
      • source: sjap; tool: unknown-tool; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
  • RXN-7979
    • Category: manual
      • source: sjap; tool: unknown-tool; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)

Pathway(s) associated

  • PWY-5945
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-5174
    • 1 reactions found over 3 reactions in the full pathway