Difference between revisions of "SJ02034"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-676 CPD-676] == * common-name: ** trans-caffeate * smiles: ** c([o-])(=o)c=cc1(c=c(o)c(o)=c...")
(Created page with "Category:gene == Gene SJ02034 == * transcription-direction: ** negative * right-end-position: ** 426445 * left-end-position: ** 422029 * centisome-position: ** 77.27232...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-676 CPD-676] ==
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== Gene SJ02034 ==
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* common-name:
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* transcription-direction:
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** trans-caffeate
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** negative
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* smiles:
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* right-end-position:
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** c([o-])(=o)c=cc1(c=c(o)c(o)=cc=1)
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** 426445
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* inchi-key:
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* left-end-position:
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** qaiprvgongvqas-duxpyhpusa-m
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** 422029
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* molecular-weight:
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* centisome-position:
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** 179.152
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** 77.27232   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-1104]]
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-1126]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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== Reaction(s) of unknown directionality ==
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* [[ATCY]]
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{{#set: common-name=trans-caffeate}}
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** Category: [[orthology]]
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{{#set: inchi-key=inchikey=qaiprvgongvqas-duxpyhpusa-m}}
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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{{#set: molecular-weight=179.152}}
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* [[AUPT]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* [[DATCY]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* [[DATUP]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* [[DCTCP]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* [[DCTUP]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* [[DGTCY]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* [[DGTUP]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* [[DTTGY]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* [[DTTUP]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* [[DUTCP]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* [[DUTUP]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* [[GTCY]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* [[GTUP]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* [[ITCY]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* [[ITUP]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* [[URACIL-PRIBOSYLTRANS-RXN]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* [[URIDINEKIN-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[URKI-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[UTCY]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* [[UTUP]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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* [[PWY-7183]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWY-7193]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=426445}}
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{{#set: left-end-position=422029}}
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{{#set: centisome-position=77.27232    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=21}}
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{{#set: nb pathway associated=2}}

Latest revision as of 11:04, 18 March 2021

Gene SJ02034

  • transcription-direction:
    • negative
  • right-end-position:
    • 426445
  • left-end-position:
    • 422029
  • centisome-position:
    • 77.27232

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7183
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-7193
    • 2 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ02034&oldid=133265"