Difference between revisions of "SJ02034"
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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-676 CPD-676] == * common-name: ** trans-caffeate * smiles: ** c([o-])(=o)c=cc1(c=c(o)c(o)=c...") |
(Created page with "Category:gene == Gene SJ07221 == * transcription-direction: ** negative * right-end-position: ** 1020521 * left-end-position: ** 998167 * centisome-position: ** 68.31725...") |
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| − | [[Category: | + | [[Category:gene]] |
| − | == | + | == Gene SJ07221 == |
| − | * | + | * transcription-direction: |
| − | ** | + | ** negative |
| − | * | + | * right-end-position: |
| − | ** | + | ** 1020521 |
| − | * | + | * left-end-position: |
| − | ** | + | ** 998167 |
| − | * | + | * centisome-position: |
| − | ** | + | ** 68.31725 |
| − | == | + | == Organism(s) associated with this gene == |
| − | * [[ | + | * [[S.japonica_sterols_curated]] |
| − | * [[ | + | == Reaction(s) associated == |
| − | + | * [[HISTIDINE--TRNA-LIGASE-RXN]] | |
| − | + | ** Category: [[annotation]] | |
| − | {{#set: | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
| − | {{#set: | + | * [[HISTIDINE-AMMONIA-LYASE-RXN]] |
| − | {{#set: | + | ** Category: [[orthology]] |
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | == Pathway(s) associated == | ||
| + | * [[TRNA-CHARGING-PWY]] | ||
| + | ** '''21''' reactions found over '''21''' reactions in the full pathway | ||
| + | * [[HISDEG-PWY]] | ||
| + | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY-5028]] | ||
| + | ** '''1''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[PWY-5030]] | ||
| + | ** '''3''' reactions found over '''6''' reactions in the full pathway | ||
| + | * [[HISHP-PWY]] | ||
| + | ** '''1''' reactions found over '''8''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=1020521}} | ||
| + | {{#set: left-end-position=998167}} | ||
| + | {{#set: centisome-position=68.31725 }} | ||
| + | {{#set: organism associated=S.japonica_sterols_curated}} | ||
| + | {{#set: nb reaction associated=2}} | ||
| + | {{#set: nb pathway associated=5}} | ||
Revision as of 20:22, 18 December 2020
Contents
Gene SJ07221
- transcription-direction:
- negative
- right-end-position:
- 1020521
- left-end-position:
- 998167
- centisome-position:
- 68.31725
Organism(s) associated with this gene
Reaction(s) associated
- HISTIDINE--TRNA-LIGASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- HISTIDINE-AMMONIA-LYASE-RXN
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- TRNA-CHARGING-PWY
- 21 reactions found over 21 reactions in the full pathway
- HISDEG-PWY
- 1 reactions found over 4 reactions in the full pathway
- PWY-5028
- 1 reactions found over 5 reactions in the full pathway
- PWY-5030
- 3 reactions found over 6 reactions in the full pathway
- HISHP-PWY
- 1 reactions found over 8 reactions in the full pathway
