Difference between revisions of "SJ02129"

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(Created page with "Category:gene == Gene SJ18634 == * transcription-direction: ** positive * right-end-position: ** 35460 * left-end-position: ** 21904 * centisome-position: ** 9.100541...")
(Created page with "Category:gene == Gene SJ20700 == * transcription-direction: ** negative * right-end-position: ** 131719 * left-end-position: ** 118339 * centisome-position: ** 57.79316...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ18634 ==
+
== Gene SJ20700 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 35460
+
** 131719
 
* left-end-position:
 
* left-end-position:
−
** 21904
+
** 118339
 
* centisome-position:
 
* centisome-position:
−
** 9.100541    
+
** 57.79316    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-15117]]
+
* [[ATPASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-5470]]
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12195]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12196]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-5471]]
+
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7817]]
+
* [[PWY-7210]]
−
** '''6''' reactions found over '''16''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]]
+
* [[PWY-7198]]
−
** '''16''' reactions found over '''19''' reactions in the full pathway
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-7184]]
−
{{#set: right-end-position=35460}}
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
{{#set: left-end-position=21904}}
+
* [[PWY-6545]]
−
{{#set: centisome-position=9.100541   }}
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
{{#set: transcription-direction=negative}}
−
{{#set: nb reaction associated=3}}
+
{{#set: right-end-position=131719}}
−
{{#set: nb pathway associated=2}}
+
{{#set: left-end-position=118339}}
 +
{{#set: centisome-position=57.79316   }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=5}}
 +
{{#set: nb pathway associated=4}}

Revision as of 14:43, 5 January 2021

Gene SJ20700

  • transcription-direction:
    • negative
  • right-end-position:
    • 131719
  • left-end-position:
    • 118339
  • centisome-position:
    • 57.79316

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway




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