Difference between revisions of "SJ02144"

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(Created page with "Category:gene == Gene SJ05204 == * transcription-direction: ** positive * right-end-position: ** 422188 * left-end-position: ** 407914 * centisome-position: ** 81.49332...")
 
(Created page with "Category:gene == Gene SJ02144 == * transcription-direction: ** negative * right-end-position: ** 82479 * left-end-position: ** 74261 * centisome-position: ** 52.671112...")
 
(9 intermediate revisions by 3 users not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ05204 ==
+
== Gene SJ02144 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 422188
+
** 82479
 
* left-end-position:
 
* left-end-position:
−
** 407914
+
** 74261
 
* centisome-position:
 
* centisome-position:
−
** 81.49332    
+
** 52.671112    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[GAPOXNPHOSPHN-RXN]]
+
* [[2.4.1.82-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[ALPHAGALACTOSID-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-11501]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-11502]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12088]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17830]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-5337]]
−
* [[GLUCONEO-PWY]]
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
** '''12''' reactions found over '''13''' reactions in the full pathway
+
* [[PWY-6524]]
−
* [[P124-PWY]]
+
** '''2''' reactions found over '''4''' reactions in the full pathway
−
** '''12''' reactions found over '''15''' reactions in the full pathway
+
* [[PWY-6525]]
−
* [[P185-PWY]]
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
** '''11''' reactions found over '''12''' reactions in the full pathway
+
* [[PWY0-1301]]
−
* [[P122-PWY]]
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
** '''16''' reactions found over '''18''' reactions in the full pathway
+
* [[PWY-6527]]
−
* [[PWY-5484]]
+
** '''7''' reactions found over '''7''' reactions in the full pathway
−
** '''10''' reactions found over '''11''' reactions in the full pathway
+
{{#set: transcription-direction=negative}}
−
* [[PWY-1042]]
+
{{#set: right-end-position=82479}}
−
** '''9''' reactions found over '''10''' reactions in the full pathway
+
{{#set: left-end-position=74261}}
−
* [[GLYCOLYSIS]]
+
{{#set: centisome-position=52.671112   }}
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[ANAGLYCOLYSIS-PWY]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[SUCSYN-PWY]]
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY66-399]]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-6901]]
 
−
** '''10''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7003]]
 
−
** '''8''' reactions found over '''6''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=422188}}
 
−
{{#set: left-end-position=407914}}
 
−
{{#set: centisome-position=81.49332   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=6}}
−
{{#set: nb pathway associated=12}}
+
{{#set: nb pathway associated=5}}

Latest revision as of 11:10, 18 March 2021

Gene SJ02144

  • transcription-direction:
    • negative
  • right-end-position:
    • 82479
  • left-end-position:
    • 74261
  • centisome-position:
    • 52.671112

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5337
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6524
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-6525
    • 2 reactions found over 5 reactions in the full pathway
  • PWY0-1301
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-6527
    • 7 reactions found over 7 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ02144&oldid=136271"