Difference between revisions of "SJ02144"

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(Created page with "Category:gene == Gene SJ05204 == * transcription-direction: ** positive * right-end-position: ** 422188 * left-end-position: ** 407914 * centisome-position: ** 81.49332...")
 
(Created page with "Category:gene == Gene SJ19768 == * transcription-direction: ** negative * right-end-position: ** 148780 * left-end-position: ** 136156 * centisome-position: ** 61.832035...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ05204 ==
+
== Gene SJ19768 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 422188
+
** 148780
 
* left-end-position:
 
* left-end-position:
−
** 407914
+
** 136156
 
* centisome-position:
 
* centisome-position:
−
** 81.49332    
+
** 61.832035    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[GAPOXNPHOSPHN-RXN]]
+
* [[PEROXID-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14240]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15288]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17352]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8635]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7214]]
−
* [[GLUCONEO-PWY]]
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
** '''12''' reactions found over '''13''' reactions in the full pathway
+
* [[PWY-7445]]
−
* [[P124-PWY]]
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
** '''12''' reactions found over '''15''' reactions in the full pathway
+
* [[PWY-5466]]
−
* [[P185-PWY]]
+
** '''2''' reactions found over '''10''' reactions in the full pathway
−
** '''11''' reactions found over '''12''' reactions in the full pathway
+
* [[PWY-6824]]
−
* [[P122-PWY]]
+
** '''2''' reactions found over '''10''' reactions in the full pathway
−
** '''16''' reactions found over '''18''' reactions in the full pathway
+
* [[PWY-5469]]
−
* [[PWY-5484]]
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
** '''10''' reactions found over '''11''' reactions in the full pathway
+
* [[PWY-5461]]
−
* [[PWY-1042]]
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
** '''9''' reactions found over '''10''' reactions in the full pathway
+
{{#set: transcription-direction=negative}}
−
* [[GLYCOLYSIS]]
+
{{#set: right-end-position=148780}}
−
** '''11''' reactions found over '''12''' reactions in the full pathway
+
{{#set: left-end-position=136156}}
−
* [[ANAGLYCOLYSIS-PWY]]
+
{{#set: centisome-position=61.832035   }}
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[SUCSYN-PWY]]
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY66-399]]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-6901]]
 
−
** '''10''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7003]]
 
−
** '''8''' reactions found over '''6''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=422188}}
 
−
{{#set: left-end-position=407914}}
 
−
{{#set: centisome-position=81.49332   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=12}}
+
{{#set: nb pathway associated=6}}

Revision as of 14:22, 26 August 2019

Gene SJ19768

  • transcription-direction:
    • negative
  • right-end-position:
    • 148780
  • left-end-position:
    • 136156
  • centisome-position:
    • 61.832035

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7214
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7445
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5466
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6824
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5469
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-5461
    • 1 reactions found over 1 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ02144&oldid=19082"