Difference between revisions of "SJ02144"

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(Created page with "Category:gene == Gene SJ06336 == * transcription-direction: ** negative * right-end-position: ** 149521 * left-end-position: ** 141597 * centisome-position: ** 29.563183...")
(Created page with "Category:gene == Gene SJ05141 == * transcription-direction: ** positive * right-end-position: ** 8145 * left-end-position: ** 3287 * centisome-position: ** 0.6553174 =...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ06336 ==
+
== Gene SJ05141 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 149521
+
** 8145
 
* left-end-position:
 
* left-end-position:
** 141597
+
** 3287
 
* centisome-position:
 
* centisome-position:
** 29.563183    
+
** 0.6553174    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[3.1.26.5-RXN]]
+
* [[3.1.3.16-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[RXN0-6480]]
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
== Pathway(s) associated ==
+
* [[PROTEIN-TYROSINE-PHOSPHATASE-RXN]]
* [[PWY0-1479]]
+
** Category: [[annotation]]
** '''4''' reactions found over '''10''' reactions in the full pathway
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
{{#set: transcription-direction=negative}}
+
** Category: [[orthology]]
{{#set: right-end-position=149521}}
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
{{#set: left-end-position=141597}}
+
{{#set: transcription-direction=positive}}
{{#set: centisome-position=29.563183   }}
+
{{#set: right-end-position=8145}}
{{#set: organism associated=S.japonica_sterols_curated}}
+
{{#set: left-end-position=3287}}
{{#set: nb reaction associated=2}}
+
{{#set: centisome-position=0.6553174   }}
{{#set: nb pathway associated=1}}
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=3}}

Revision as of 14:52, 5 January 2021

Gene SJ05141

  • transcription-direction:
    • positive
  • right-end-position:
    • 8145
  • left-end-position:
    • 3287
  • centisome-position:
    • 0.6553174

Organism(s) associated with this gene

Reaction(s) associated