Difference between revisions of "SJ02144"

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(Created page with "Category:gene == Gene SJ20675 == * transcription-direction: ** positive * right-end-position: ** 11137 * left-end-position: ** 6884 * centisome-position: ** 3.3614595...")
(Created page with "Category:gene == Gene SJ02144 == * transcription-direction: ** negative * right-end-position: ** 82479 * left-end-position: ** 74261 * centisome-position: ** 52.671112...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ20675 ==
+
== Gene SJ02144 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 11137
+
** 82479
 
* left-end-position:
 
* left-end-position:
−
** 6884
+
** 74261
 
* centisome-position:
 
* centisome-position:
−
** 3.3614595    
+
** 52.671112    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[2.4.1.82-RXN]]
−
* [[1.3.99.5-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[CHOLESTENONE-5-ALPHA-REDUCTASE-RXN]]
+
* [[ALPHAGALACTOSID-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[CORTISONE-ALPHA-REDUCTASE-RXN]]
+
* [[RXN-11501]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PROGESTERONE-5-ALPHA-REDUCTASE-RXN]]
+
* [[RXN-11502]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12124]]
+
* [[RXN-12088]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12267]]
+
* [[RXN-17830]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-13682]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-711]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-9971]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN66-343]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6032]]
+
* [[PWY-5337]]
−
** '''1''' reactions found over '''10''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7455]]
+
* [[PWY-6524]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-6943]]
+
* [[PWY-6525]]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-699]]
+
* [[PWY0-1301]]
−
** '''3''' reactions found over '''25''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-2582]]
+
* [[PWY-6527]]
−
** '''4''' reactions found over '''21''' reactions in the full pathway
+
** '''7''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-6129]]
+
{{#set: transcription-direction=negative}}
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
{{#set: right-end-position=82479}}
−
* [[PWY66-378]]
+
{{#set: left-end-position=74261}}
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
{{#set: centisome-position=52.671112   }}
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=11137}}
 
−
{{#set: left-end-position=6884}}
 
−
{{#set: centisome-position=3.3614595   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=10}}
+
{{#set: nb reaction associated=6}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=5}}

Latest revision as of 11:10, 18 March 2021

Gene SJ02144

  • transcription-direction:
    • negative
  • right-end-position:
    • 82479
  • left-end-position:
    • 74261
  • centisome-position:
    • 52.671112

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5337
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6524
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-6525
    • 2 reactions found over 5 reactions in the full pathway
  • PWY0-1301
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-6527
    • 7 reactions found over 7 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ02144&oldid=136271"