Difference between revisions of "SJ02145"
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(Created page with "Category:gene == Gene SJ00944 == * transcription-direction: ** positive * right-end-position: ** 40304 * left-end-position: ** 36328 * centisome-position: ** 6.501318...") |
(Created page with "Category:gene == Gene SJ02145 == * transcription-direction: ** negative * right-end-position: ** 109294 * left-end-position: ** 85384 * centisome-position: ** 60.56032...") |
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[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ02145 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 109294 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 85384 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 60.56032 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
| − | * [[S. | + | * [[S.japonica_carotenoid_curated]] |
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[2. | + | * [[2.4.1.151-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[2. | + | * [[2.4.1.67-RXN]] |
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[2.4.1.82-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[ALPHAGALACTOSID-RXN]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[RXN-11501]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[RXN-12088]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-7434]] |
| − | ** '''7''' reactions found over ''' | + | ** '''5''' reactions found over '''8''' reactions in the full pathway |
| − | {{#set: transcription-direction= | + | * [[PWY-5337]] |
| − | {{#set: right-end-position= | + | ** '''3''' reactions found over '''3''' reactions in the full pathway |
| − | {{#set: left-end-position= | + | * [[PWY-6524]] |
| − | {{#set: centisome-position= | + | ** '''2''' reactions found over '''4''' reactions in the full pathway |
| − | {{#set: organism associated=S. | + | * [[PWY-6525]] |
| − | {{#set: nb reaction associated= | + | ** '''2''' reactions found over '''5''' reactions in the full pathway |
| − | {{#set: nb pathway associated= | + | * [[PWY0-1301]] |
| + | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
| + | * [[PWY-6527]] | ||
| + | ** '''7''' reactions found over '''7''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=109294}} | ||
| + | {{#set: left-end-position=85384}} | ||
| + | {{#set: centisome-position=60.56032 }} | ||
| + | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| + | {{#set: nb reaction associated=6}} | ||
| + | {{#set: nb pathway associated=6}} | ||
Latest revision as of 11:04, 18 March 2021
Contents
Gene SJ02145
- transcription-direction:
- negative
- right-end-position:
- 109294
- left-end-position:
- 85384
- centisome-position:
- 60.56032
Organism(s) associated with this gene
Reaction(s) associated
- 2.4.1.151-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- 2.4.1.67-RXN
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- 2.4.1.82-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- ALPHAGALACTOSID-RXN
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN-11501
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN-12088
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- PWY-7434
- 5 reactions found over 8 reactions in the full pathway
- PWY-5337
- 3 reactions found over 3 reactions in the full pathway
- PWY-6524
- 2 reactions found over 4 reactions in the full pathway
- PWY-6525
- 2 reactions found over 5 reactions in the full pathway
- PWY0-1301
- 1 reactions found over 1 reactions in the full pathway
- PWY-6527
- 7 reactions found over 7 reactions in the full pathway
