Difference between revisions of "SJ02145"

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(Created page with "Category:gene == Gene SJ08856 == * transcription-direction: ** positive * right-end-position: ** 32704 * left-end-position: ** 17301 * centisome-position: ** 36.001 ==...")
(Created page with "Category:gene == Gene SJ02145 == * transcription-direction: ** negative * right-end-position: ** 109294 * left-end-position: ** 85384 * centisome-position: ** 60.56032...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ08856 ==
+
== Gene SJ02145 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 32704
+
** 109294
 
* left-end-position:
 
* left-end-position:
−
** 17301
+
** 85384
 
* centisome-position:
 
* centisome-position:
−
** 36.001    
+
** 60.56032    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[2.4.1.151-RXN]]
−
* [[ATP-ADENYLYLTRANSFERASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[2.4.1.67-RXN]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[DCTP-PYROPHOSPHATASE-RXN]]
+
* [[2.4.1.82-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[DUTP-PYROP-RXN]]
+
* [[ALPHAGALACTOSID-RXN]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[NUCLEOTIDE-PYROPHOSPHATASE-RXN]]
+
* [[RXN-11501]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-14139]]
+
* [[RXN-12088]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-14140]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-383]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-384]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-385]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-5107]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-6382]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[SULFATE-ADENYLYLTRANSFERASE-ADP-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7206]]
+
* [[PWY-7434]]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''5''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-7187]]
+
* [[PWY-5337]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY0-166]]
+
* [[PWY-6524]]
−
** '''14''' reactions found over '''13''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7184]]
+
* [[PWY-6525]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-6545]]
+
* [[PWY0-1301]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-7821]]
+
* [[PWY-6527]]
−
** '''2''' reactions found over '''9''' reactions in the full pathway
+
** '''7''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-5279]]
+
{{#set: transcription-direction=negative}}
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
{{#set: right-end-position=109294}}
−
{{#set: transcription-direction=positive}}
+
{{#set: left-end-position=85384}}
−
{{#set: right-end-position=32704}}
+
{{#set: centisome-position=60.56032   }}
−
{{#set: left-end-position=17301}}
 
−
{{#set: centisome-position=36.001   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=12}}
+
{{#set: nb reaction associated=6}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=6}}

Latest revision as of 11:04, 18 March 2021

Gene SJ02145

  • transcription-direction:
    • negative
  • right-end-position:
    • 109294
  • left-end-position:
    • 85384
  • centisome-position:
    • 60.56032

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7434
    • 5 reactions found over 8 reactions in the full pathway
  • PWY-5337
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6524
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-6525
    • 2 reactions found over 5 reactions in the full pathway
  • PWY0-1301
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-6527
    • 7 reactions found over 7 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ02145&oldid=133499"