Difference between revisions of "SJ02182"
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(Created page with "Category:gene == Gene SJ12963 == * transcription-direction: ** negative * right-end-position: ** 250407 * left-end-position: ** 237577 * centisome-position: ** 68.185585...") |
(Created page with "Category:gene == Gene SJ02182 == * transcription-direction: ** positive * right-end-position: ** 369860 * left-end-position: ** 340317 * centisome-position: ** 62.615246...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ02182 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 369860 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 340317 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 62.615246 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[RIBOFLAVINSYNREDUC-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | |||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | * [[ | + | * [[RXN-10057]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | {{#set: transcription-direction= | + | * [[RXN-14171]] |
| − | {{#set: right-end-position= | + | ** Category: [[annotation]] |
| − | {{#set: left-end-position= | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
| − | {{#set: centisome-position= | + | == Pathway(s) associated == |
| + | * [[RIBOSYN2-PWY]] | ||
| + | ** '''8''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY-6168]] | ||
| + | ** '''7''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY-6167]] | ||
| + | ** '''5''' reactions found over '''10''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=positive}} | ||
| + | {{#set: right-end-position=369860}} | ||
| + | {{#set: left-end-position=340317}} | ||
| + | {{#set: centisome-position=62.615246 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
{{#set: nb reaction associated=3}} | {{#set: nb reaction associated=3}} | ||
| + | {{#set: nb pathway associated=3}} | ||
Latest revision as of 11:08, 18 March 2021
Contents
Gene SJ02182
- transcription-direction:
- positive
- right-end-position:
- 369860
- left-end-position:
- 340317
- centisome-position:
- 62.615246
Organism(s) associated with this gene
Reaction(s) associated
- RIBOFLAVINSYNREDUC-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-10057
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-14171
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- RIBOSYN2-PWY
- 8 reactions found over 9 reactions in the full pathway
- PWY-6168
- 7 reactions found over 9 reactions in the full pathway
- PWY-6167
- 5 reactions found over 10 reactions in the full pathway
