Difference between revisions of "SJ02182"

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(Created page with "Category:gene == Gene SJ03879 == * transcription-direction: ** positive * right-end-position: ** 38277 * left-end-position: ** 32554 * centisome-position: ** 6.2690773...")
(Created page with "Category:gene == Gene SJ02182 == * transcription-direction: ** positive * right-end-position: ** 369860 * left-end-position: ** 340317 * centisome-position: ** 62.615246...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ03879 ==
+
== Gene SJ02182 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 38277
+
** 369860
 
* left-end-position:
 
* left-end-position:
−
** 32554
+
** 340317
 
* centisome-position:
 
* centisome-position:
−
** 6.2690773    
+
** 62.615246    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[RIBOFLAVINSYNREDUC-RXN]]
−
* [[3.1.1.64-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[AMINOCYL-TRNA-HYDROLASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[CARBOXYLESTERASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-10711]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-10767]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12252]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12460]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-12575]]
+
* [[RXN-10057]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-16637]]
+
* [[RXN-14171]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXNQT-4366]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6303]]
+
* [[RIBOSYN2-PWY]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY490-4]]
+
* [[PWY-6168]]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''7''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-6857]]
+
* [[PWY-6167]]
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''5''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-6308]]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=38277}}
+
{{#set: right-end-position=369860}}
−
{{#set: left-end-position=32554}}
+
{{#set: left-end-position=340317}}
−
{{#set: centisome-position=6.2690773   }}
+
{{#set: centisome-position=62.615246   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=11}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=3}}

Latest revision as of 11:08, 18 March 2021

Gene SJ02182

  • transcription-direction:
    • positive
  • right-end-position:
    • 369860
  • left-end-position:
    • 340317
  • centisome-position:
    • 62.615246

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • RIBOSYN2-PWY
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-6168
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-6167
    • 5 reactions found over 10 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ02182&oldid=135372"