Difference between revisions of "SJ02191"

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(Created page with "Category:gene == Gene SJ19186 == * transcription-direction: ** positive * right-end-position: ** 86457 * left-end-position: ** 67033 * centisome-position: ** 28.988495...")
(Created page with "Category:gene == Gene SJ02191 == * transcription-direction: ** positive * right-end-position: ** 470135 * left-end-position: ** 463533 * centisome-position: ** 85.28588...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ19186 ==
+
== Gene SJ02191 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 86457
+
** 470135
 
* left-end-position:
 
* left-end-position:
−
** 67033
+
** 463533
 
* centisome-position:
 
* centisome-position:
−
** 28.988495    
+
** 85.28588    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[GLUTAMIDOTRANS-RXN]]
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[ACID-PHOSPHATASE-RXN]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[GLUTAMIN-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PRIBFAICARPISOM-RXN]]
+
* [[RXN-12613]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PRICI]]
+
* [[RXN-5822]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-17900]]
+
* [[THIAMINASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[HISTSYN-PWY]]
+
* [[PWY-6348]]
−
** '''10''' reactions found over '''10''' reactions in the full pathway
 
−
* [[CITRULBIO-PWY]]
 
−
** '''7''' reactions found over '''8''' reactions in the full pathway
 
−
* [[GLUTAMINDEG-PWY]]
 
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-6899]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[NADPHOS-DEPHOS-PWY]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5083]]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[NAD-BIOSYNTHESIS-II]]
 +
** '''4''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7356]]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=86457}}
+
{{#set: right-end-position=470135}}
−
{{#set: left-end-position=67033}}
+
{{#set: left-end-position=463533}}
−
{{#set: centisome-position=28.988495   }}
+
{{#set: centisome-position=85.28588   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=5}}
 
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=6}}

Latest revision as of 11:08, 18 March 2021

Gene SJ02191

  • transcription-direction:
    • positive
  • right-end-position:
    • 470135
  • left-end-position:
    • 463533
  • centisome-position:
    • 85.28588

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6348
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-6899
    • 1 reactions found over 2 reactions in the full pathway
  • NADPHOS-DEPHOS-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5083
    • 5 reactions found over 6 reactions in the full pathway
  • NAD-BIOSYNTHESIS-II
    • 4 reactions found over 3 reactions in the full pathway
  • PWY-7356
    • 6 reactions found over 7 reactions in the full pathway




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