Difference between revisions of "SJ02214"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ22264 == * transcription-direction: ** positive * right-end-position: ** 366888 * left-end-position: ** 356999 * centisome-position: ** 61.268764...")
(Created page with "Category:gene == Gene SJ20890 == * transcription-direction: ** negative * right-end-position: ** 395681 * left-end-position: ** 390837 * centisome-position: ** 64.01938...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ22264 ==
+
== Gene SJ20890 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 366888
+
** 395681
 
* left-end-position:
 
* left-end-position:
−
** 356999
+
** 390837
 
* centisome-position:
 
* centisome-position:
−
** 61.268764    
+
** 64.01938    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[6PGLUCONDEHYDROG-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[3.1.1.64-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PYRROLINECARBREDUCT-RXN]]
+
* [[3.1.1.73-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-9952]]
+
* [[CARBOXYLESTERASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN66-546]]
+
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10711]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10767]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12086]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-12252]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12575]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12579]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXNQT-4366]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[TRIACYLGLYCEROL-LIPASE-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[P122-PWY]]
+
* [[PWY-6784]]
−
** '''16''' reactions found over '''18''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-3341]]
+
* [[PWY-6303]]
−
** '''4''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PROSYN-PWY]]
+
* [[PWY-6857]]
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-6344]]
+
* [[LIPAS-PWY]]
−
** '''2''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-4981]]
+
{{#set: transcription-direction=negative}}
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
{{#set: right-end-position=395681}}
−
* [[ARG-PRO-PWY]]
+
{{#set: left-end-position=390837}}
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
{{#set: centisome-position=64.01938   }}
−
* [[OXIDATIVEPENT-PWY]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=366888}}
 
−
{{#set: left-end-position=356999}}
 
−
{{#set: centisome-position=61.268764   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=12}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=4}}

Revision as of 11:09, 15 January 2021

Gene SJ20890

  • transcription-direction:
    • negative
  • right-end-position:
    • 395681
  • left-end-position:
    • 390837
  • centisome-position:
    • 64.01938

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6784
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6303
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6857
    • 3 reactions found over 7 reactions in the full pathway
  • LIPAS-PWY
    • 2 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ02214&oldid=109172"