Difference between revisions of "SJ02214"

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(Created page with "Category:gene == Gene SJ20890 == * transcription-direction: ** negative * right-end-position: ** 395681 * left-end-position: ** 390837 * centisome-position: ** 64.01938...")
(Created page with "Category:gene == Gene SJ02214 == * transcription-direction: ** positive * right-end-position: ** 96011 * left-end-position: ** 55580 * centisome-position: ** 39.7017 =...")
 
(One intermediate revision by one other user not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ20890 ==
+
== Gene SJ02214 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 395681
+
** 96011
 
* left-end-position:
 
* left-end-position:
−
** 390837
+
** 55580
 
* centisome-position:
 
* centisome-position:
−
** 64.01938    
+
** 39.7017    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
−
* [[3.1.1.64-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[3.1.1.73-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[CARBOXYLESTERASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-10711]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-10767]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12086]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-12252]]
+
* [[BIOTIN-CARBOXYL-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12575]]
+
* [[DALADALALIG-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12579]]
+
* [[METHYLCROTONYL-COA-CARBOXYLASE-RXN]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXNQT-4366]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[TRIACYLGLYCEROL-LIPASE-RXN]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
== Pathway(s) associated ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[PWY-7388]]
 +
** '''7''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-6679]]
 +
** '''1''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY0-1264]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5744]]
 +
** '''4''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-5743]]
 +
** '''5''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-5789]]
 +
** '''8''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY-7953]]
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-6386]]
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-6387]]
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
* [[LEU-DEG2-PWY]]
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 
</div>
 
</div>
−
== Pathway(s) associated ==
+
{{#set: transcription-direction=positive}}
−
* [[PWY-6784]]
+
{{#set: right-end-position=96011}}
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
{{#set: left-end-position=55580}}
−
* [[PWY-6303]]
+
{{#set: centisome-position=39.7017   }}
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6857]]
 
−
** '''3''' reactions found over '''7''' reactions in the full pathway
 
−
* [[LIPAS-PWY]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=395681}}
 
−
{{#set: left-end-position=390837}}
 
−
{{#set: centisome-position=64.01938   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=12}}
+
{{#set: nb reaction associated=4}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=10}}

Latest revision as of 11:08, 18 March 2021

Gene SJ02214

  • transcription-direction:
    • positive
  • right-end-position:
    • 96011
  • left-end-position:
    • 55580
  • centisome-position:
    • 39.7017

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7388
    • 7 reactions found over 11 reactions in the full pathway
  • PWY-6679
    • 1 reactions found over 9 reactions in the full pathway
  • PWY0-1264
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5744
    • 4 reactions found over 13 reactions in the full pathway
  • PWY-5743
    • 5 reactions found over 13 reactions in the full pathway
  • PWY-5789
    • 8 reactions found over 18 reactions in the full pathway
  • PWY-7953
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-6386
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-6387
    • 2 reactions found over 8 reactions in the full pathway
  • LEU-DEG2-PWY
    • 4 reactions found over 6 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ02214&oldid=135216"