Difference between revisions of "SJ02233"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=XYLULOSE-5-PHOSPHATE XYLULOSE-5-PHOSPHATE] == * common-name: ** d-xylulose 5-phosphate * smiles...")
(Created page with "Category:gene == Gene SJ02233 == * transcription-direction: ** positive * right-end-position: ** 70670 * left-end-position: ** 34861 * centisome-position: ** 24.937408...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=XYLULOSE-5-PHOSPHATE XYLULOSE-5-PHOSPHATE] ==
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== Gene SJ02233 ==
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* common-name:
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* transcription-direction:
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** d-xylulose 5-phosphate
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** positive
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* smiles:
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* right-end-position:
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** c(op([o-])(=o)[o-])c(o)c(o)c(=o)co
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** 70670
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* inchi-key:
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* left-end-position:
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** fnzlkvnuwiipsj-rfzpgflssa-l
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** 34861
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* molecular-weight:
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* centisome-position:
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** 228.095
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** 24.937408   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[1TRANSKETO-RXN]]
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* [[S.japonica_carotenoid_curated]]
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* [[2TRANSKETO-RXN]]
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== Reaction(s) associated ==
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* [[RIBULP3EPIM-RXN]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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== Reaction(s) known to produce the compound ==
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* [[ATPASE-RXN]]
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* [[1TRANSKETO-RXN]]
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** Category: [[annotation]]
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* [[2TRANSKETO-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RIBULP3EPIM-RXN]]
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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* [[XYLULOKIN-RXN]]
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: common-name=d-xylulose 5-phosphate}}
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* [[PROTEIN-KINASE-RXN]]
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{{#set: inchi-key=inchikey=fnzlkvnuwiipsj-rfzpgflssa-l}}
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** Category: [[annotation]]
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{{#set: molecular-weight=228.095}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12195]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12196]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-8443]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN0-5462]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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* [[PWY-6545]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7210]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7198]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7184]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-5381]]
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** '''6''' reactions found over '''11''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=70670}}
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{{#set: left-end-position=34861}}
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{{#set: centisome-position=24.937408    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=7}}
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{{#set: nb pathway associated=5}}

Latest revision as of 11:01, 18 March 2021

Gene SJ02233

  • transcription-direction:
    • positive
  • right-end-position:
    • 70670
  • left-end-position:
    • 34861
  • centisome-position:
    • 24.937408

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-5381
    • 6 reactions found over 11 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ02233&oldid=131860"