Difference between revisions of "SJ02237"

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(Created page with "Category:gene == Gene SJ19533 == * transcription-direction: ** positive * right-end-position: ** 82926 * left-end-position: ** 75409 * centisome-position: ** 33.429977...")
 
(Created page with "Category:gene == Gene SJ07227 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * RXN-8025 ** Category:...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ19533 ==
+
== Gene SJ07227 ==
* transcription-direction:
 
** positive
 
* right-end-position:
 
** 82926
 
* left-end-position:
 
** 75409
 
* centisome-position:
 
** 33.429977   
 
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[3.4.21.89-RXN]]
+
* [[RXN-8025]]
** Category: [[annotation]]
+
** Category: [[manual]]
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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*** source: [[sjap]]; tool: [[unknown-tool]]; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
{{#set: transcription-direction=positive}}
+
* [[RXN-8026]]
{{#set: right-end-position=82926}}
+
** Category: [[manual]]
{{#set: left-end-position=75409}}
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*** source: [[sjap]]; tool: [[unknown-tool]]; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
{{#set: centisome-position=33.429977    }}
+
* [[RXN1F-152]]
 +
** Category: [[manual]]
 +
*** source: [[sjap]]; tool: [[unknown-tool]]; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
 +
* [[UNSPECIFIC-MONOOXYGENASE-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[PWY-7638]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5944]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5288]]
 +
** '''2''' reactions found over '''10''' reactions in the full pathway
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=4}}
 +
{{#set: nb pathway associated=3}}

Revision as of 14:21, 26 August 2019

Gene SJ07227

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7638
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-5944
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-5288
    • 2 reactions found over 10 reactions in the full pathway