Difference between revisions of "SJ02270"

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(Created page with "Category:gene == Gene SJ00045 == * transcription-direction: ** positive * right-end-position: ** 706887 * left-end-position: ** 685451 * centisome-position: ** 46.659313...")
(Created page with "Category:gene == Gene SJ02270 == * transcription-direction: ** positive * right-end-position: ** 482079 * left-end-position: ** 475295 * centisome-position: ** 87.4965...")
 
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ00045 ==
+
== Gene SJ02270 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
** 706887
+
** 482079
 
* left-end-position:
 
* left-end-position:
** 685451
+
** 475295
 
* centisome-position:
 
* centisome-position:
** 46.659313    
+
** 87.4965    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[GLYOXI-RXN]]
* [[CHORISMATEMUT-RXN]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[PPDH]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* [[PREPHENATE-DEHYDROGENASE-NADP+-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[PREPHENATEDEHYDRAT-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[PREPHENATEDEHYDROG-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-5682]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY-3462]]
+
* [[PWY-5386]]
** '''2''' reactions found over '''3''' reactions in the full pathway
 
* [[TYRSYN]]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-6627]]
 
** '''3''' reactions found over '''15''' reactions in the full pathway
 
* [[PWY-3461]]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-6120]]
 
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
** '''2''' reactions found over '''3''' reactions in the full pathway
* [[PHESYN]]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-7626]]
 
** '''1''' reactions found over '''10''' reactions in the full pathway
 
* [[PWY-7432]]
 
** '''3''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-7303]]
 
** '''1''' reactions found over '''4''' reactions in the full pathway
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
{{#set: right-end-position=706887}}
+
{{#set: right-end-position=482079}}
{{#set: left-end-position=685451}}
+
{{#set: left-end-position=475295}}
{{#set: centisome-position=46.659313   }}
+
{{#set: centisome-position=87.4965   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=9}}
+
{{#set: nb pathway associated=1}}

Latest revision as of 11:09, 18 March 2021

Gene SJ02270

  • transcription-direction:
    • positive
  • right-end-position:
    • 482079
  • left-end-position:
    • 475295
  • centisome-position:
    • 87.4965

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5386
    • 2 reactions found over 3 reactions in the full pathway