Difference between revisions of "SJ02342"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ14996 == * transcription-direction: ** positive * right-end-position: ** 675505 * left-end-position: ** 645290 * centisome-position: ** 91.11807...")
(Created page with "Category:gene == Gene SJ20370 == * transcription-direction: ** negative * right-end-position: ** 148342 * left-end-position: ** 132828 * centisome-position: ** 63.727867...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ14996 ==
+
== Gene SJ20370 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 675505
+
** 148342
 
* left-end-position:
 
* left-end-position:
−
** 645290
+
** 132828
 
* centisome-position:
 
* centisome-position:
−
** 91.11807    
+
** 63.727867    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PROTEIN-KINASE-RXN]]
+
* [[HEME-OXYGENASE-DECYCLIZING-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17523]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-8443]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-5381]]
+
* [[PWY-5874]]
−
** '''6''' reactions found over '''11''' reactions in the full pathway
+
** '''1''' reactions found over '''6''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-7578]]
−
{{#set: right-end-position=675505}}
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
{{#set: left-end-position=645290}}
+
* [[PWY-7170]]
−
{{#set: centisome-position=91.11807   }}
+
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7845]]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-5917]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5915]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7580]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7579]]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=148342}}
 +
{{#set: left-end-position=132828}}
 +
{{#set: centisome-position=63.727867   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=2}}
 
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=8}}

Revision as of 13:07, 14 January 2021

Gene SJ20370

  • transcription-direction:
    • negative
  • right-end-position:
    • 148342
  • left-end-position:
    • 132828
  • centisome-position:
    • 63.727867

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5874
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-7578
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7170
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7845
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-5917
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-5915
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7580
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-7579
    • 3 reactions found over 5 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ02342&oldid=84393"