Difference between revisions of "SJ02379"

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(Created page with "Category:gene == Gene SJ03718 == * transcription-direction: ** negative * right-end-position: ** 188706 * left-end-position: ** 176499 * centisome-position: ** 33.94897...")
(Created page with "Category:gene == Gene SJ02379 == * transcription-direction: ** positive * right-end-position: ** 44379 * left-end-position: ** 29269 * centisome-position: ** 21.466394...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ03718 ==
+
== Gene SJ02379 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 188706
+
** 44379
 
* left-end-position:
 
* left-end-position:
−
** 176499
+
** 29269
 
* centisome-position:
 
* centisome-position:
−
** 33.94897    
+
** 21.466394    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[1.8.1.4-RXN]]
+
* [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PYRNUTRANSHYDROGEN-RXN]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: transcription-direction=positive}}
−
* [[RXN-7716]]
+
{{#set: right-end-position=44379}}
−
** Category: [[annotation]]
+
{{#set: left-end-position=29269}}
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: centisome-position=21.466394   }}
−
* [[RXN-7719]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-8629]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-1132]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
== Pathway(s) associated ==
 
−
* [[PWY-5083]]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5084]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5046]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[GLYCLEAV-PWY]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PYRUVDEHYD-PWY]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=188706}}
 
−
{{#set: left-end-position=176499}}
 
−
{{#set: centisome-position=33.94897   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=5}}
 

Latest revision as of 11:09, 18 March 2021

Gene SJ02379

  • transcription-direction:
    • positive
  • right-end-position:
    • 44379
  • left-end-position:
    • 29269
  • centisome-position:
    • 21.466394

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ02379&oldid=135832"