Difference between revisions of "SJ02434"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-9866 CPD-9866] == * common-name: ** 2-methoxy-6-(all-trans-nonaprenyl)phenol * smiles: ** c...")
 
(Created page with "Category:gene == Gene SJ02434 == * transcription-direction: ** negative * right-end-position: ** 99768 * left-end-position: ** 83548 * centisome-position: ** 15.419825...")
 
(9 intermediate revisions by 5 users not shown)
Line 1: Line 1:
−
[[Category:metabolite]]
+
[[Category:gene]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-9866 CPD-9866] ==
+
== Gene SJ02434 ==
−
* common-name:
+
* transcription-direction:
−
** 2-methoxy-6-(all-trans-nonaprenyl)phenol
+
** negative
−
* smiles:
+
* right-end-position:
−
** cc(=cccc(=cccc(=cccc(=cccc(=cccc(=cccc(=cccc(=cccc(=ccc1(c(o)=c(oc)c=cc=1))c)c)c)c)c)c)c)c)c
+
** 99768
−
* inchi-key:
+
* left-end-position:
−
** xryxraoxvpwhhk-ssrazkmssa-n
+
** 83548
−
* molecular-weight:
+
* centisome-position:
−
** 737.203
+
** 15.419825   
−
== Reaction(s) known to consume the compound ==
+
== Organism(s) associated with this gene  ==
−
== Reaction(s) known to produce the compound ==
+
* [[S.japonica_carotenoid_curated]]
−
* [[RXN-9240]]
+
== Reaction(s) associated ==
−
== Reaction(s) of unknown directionality ==
+
* [[6PFRUCTPHOS-RXN]]
−
{{#set: common-name=2-methoxy-6-(all-trans-nonaprenyl)phenol}}
+
** Category: [[annotation]]
−
{{#set: inchi-key=inchikey=xryxraoxvpwhhk-ssrazkmssa-n}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: molecular-weight=737.203}}
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[PFK_]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[PWY-1861]]
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5484]]
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-1042]]
 +
** '''9''' reactions found over '''10''' reactions in the full pathway
 +
* [[GLYCOLYSIS]]
 +
** '''11''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-7385]]
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[ANAGLYCOLYSIS-PWY]]
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=99768}}
 +
{{#set: left-end-position=83548}}
 +
{{#set: centisome-position=15.419825    }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=2}}
 +
{{#set: nb pathway associated=6}}

Latest revision as of 11:02, 18 March 2021

Gene SJ02434

  • transcription-direction:
    • negative
  • right-end-position:
    • 99768
  • left-end-position:
    • 83548
  • centisome-position:
    • 15.419825

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-1861
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-5484
    • 10 reactions found over 11 reactions in the full pathway
  • PWY-1042
    • 9 reactions found over 10 reactions in the full pathway
  • GLYCOLYSIS
    • 11 reactions found over 12 reactions in the full pathway
  • PWY-7385
    • 7 reactions found over 9 reactions in the full pathway
  • ANAGLYCOLYSIS-PWY
    • 10 reactions found over 11 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ02434&oldid=132557"