Difference between revisions of "SJ02434"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-18666 CPD-18666] == * common-name: ** epoxypheophorbide a * smiles: ** ccc1(=c(c)c3(=nc1=cc...")
(Created page with "Category:gene == Gene SJ02434 == * transcription-direction: ** negative * right-end-position: ** 99768 * left-end-position: ** 83548 * centisome-position: ** 15.419825...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-18666 CPD-18666] ==
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== Gene SJ02434 ==
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* common-name:
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* transcription-direction:
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** epoxypheophorbide a
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** negative
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* smiles:
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* right-end-position:
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** ccc1(=c(c)c3(=nc1=cc6(=c(c)c7(c(=o)[c-](c(oc)=o)c(=c2(c(ccc(=o)[o-])c(c)c(=n2)c=c5(c(c)=c(c=c)c4(oc34)(n5))))c(n6)=7))))
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** 99768
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* inchi-key:
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* left-end-position:
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** zmtpzdvbgynplz-ygowezgdsa-m
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** 83548
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* molecular-weight:
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* centisome-position:
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** 606.677
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** 15.419825   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to produce the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-17252]]
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== Reaction(s) associated ==
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== Reaction(s) of unknown directionality ==
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* [[6PFRUCTPHOS-RXN]]
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{{#set: common-name=epoxypheophorbide a}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=zmtpzdvbgynplz-ygowezgdsa-m}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=606.677}}
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[PFK_]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-1861]]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-5484]]
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** '''10''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-1042]]
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** '''9''' reactions found over '''10''' reactions in the full pathway
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* [[GLYCOLYSIS]]
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** '''11''' reactions found over '''12''' reactions in the full pathway
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* [[PWY-7385]]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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* [[ANAGLYCOLYSIS-PWY]]
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** '''10''' reactions found over '''11''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=99768}}
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{{#set: left-end-position=83548}}
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{{#set: centisome-position=15.419825    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=2}}
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{{#set: nb pathway associated=6}}

Latest revision as of 11:02, 18 March 2021

Gene SJ02434

  • transcription-direction:
    • negative
  • right-end-position:
    • 99768
  • left-end-position:
    • 83548
  • centisome-position:
    • 15.419825

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-1861
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-5484
    • 10 reactions found over 11 reactions in the full pathway
  • PWY-1042
    • 9 reactions found over 10 reactions in the full pathway
  • GLYCOLYSIS
    • 11 reactions found over 12 reactions in the full pathway
  • PWY-7385
    • 7 reactions found over 9 reactions in the full pathway
  • ANAGLYCOLYSIS-PWY
    • 10 reactions found over 11 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ02434&oldid=132557"