Difference between revisions of "SJ02439"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-AMINOMUCONATE_SEMIALDEHYDE 2-AMINOMUCONATE_SEMIALDEHYDE] == * common-name: ** (2z,4e)-2-amino...")
(Created page with "Category:gene == Gene SJ02439 == * transcription-direction: ** negative * right-end-position: ** 77200 * left-end-position: ** 72574 * centisome-position: ** 53.514336...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-AMINOMUCONATE_SEMIALDEHYDE 2-AMINOMUCONATE_SEMIALDEHYDE] ==
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== Gene SJ02439 ==
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* common-name:
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* transcription-direction:
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** (2z,4e)-2-amino-6-oxohexa-2,4-dienoate
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** negative
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* smiles:
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* right-end-position:
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** c(c=c(c([o-])=o)n)=c[ch]=o
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** 77200
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* inchi-key:
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* left-end-position:
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** qcgtzpzkjptaep-wftyeqlwsa-m
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** 72574
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* molecular-weight:
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* centisome-position:
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** 140.118
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** 53.514336   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to produce the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[AMINO-CARBOXYMUCONATE-SEMIALDEHYDE-RXN]]
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== Reaction(s) associated ==
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== Reaction(s) of unknown directionality ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: common-name=(2z,4e)-2-amino-6-oxohexa-2,4-dienoate}}
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* [[GSHTRAN-RXN]]
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{{#set: inchi-key=inchikey=qcgtzpzkjptaep-wftyeqlwsa-m}}
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** Category: [[annotation]]
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{{#set: molecular-weight=140.118}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[GST-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[PROSTAGLANDIN-D-SYNTHASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-13673]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-15680]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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* [[PWY-6842]]
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** '''5''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-4061]]
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** '''4''' reactions found over '''8''' reactions in the full pathway
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* [[PWY66-374]]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7112]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7533]]
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** '''3''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=77200}}
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{{#set: left-end-position=72574}}
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{{#set: centisome-position=53.514336    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=5}}
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{{#set: nb pathway associated=5}}

Latest revision as of 11:02, 18 March 2021

Gene SJ02439

  • transcription-direction:
    • negative
  • right-end-position:
    • 77200
  • left-end-position:
    • 72574
  • centisome-position:
    • 53.514336

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6842
    • 5 reactions found over 9 reactions in the full pathway
  • PWY-4061
    • 4 reactions found over 8 reactions in the full pathway
  • PWY66-374
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-7112
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7533
    • 3 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ02439&oldid=132564"