Difference between revisions of "SJ02439"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-KETOGLUTARATE 2-KETOGLUTARATE] == * common-name: ** 2-oxoglutarate * smiles: ** c(cc([o-])=o)...")
 
(Created page with "Category:gene == Gene SJ02439 == * transcription-direction: ** negative * right-end-position: ** 77200 * left-end-position: ** 72574 * centisome-position: ** 53.514336...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-KETOGLUTARATE 2-KETOGLUTARATE] ==
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== Gene SJ02439 ==
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* common-name:
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* transcription-direction:
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** 2-oxoglutarate
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** negative
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* smiles:
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* right-end-position:
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** c(cc([o-])=o)c(=o)c([o-])=o
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** 77200
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* inchi-key:
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* left-end-position:
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** kpgxrsrhynqifn-uhfffaoysa-l
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** 72574
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* molecular-weight:
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* centisome-position:
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** 144.084
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** 53.514336   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
 +
* [[S.japonica_carotenoid_curated]]
 +
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[1.14.11.1-RXN]]
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* [[GSHTRAN-RXN]]
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* [[1.14.11.18-RXN]]
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** Category: [[annotation]]
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* [[1.14.11.2-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[1.5.1.19-RXN]]
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** Category: [[orthology]]
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* [[2-HYDROXYGLUTARATE-DEHYDROGENASE-RXN]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[2.5.1.64-RXN]]
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* [[GST-RXN]]
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* [[2.6.1.57-RXN]]
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** Category: [[annotation]]
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* [[2.6.1.7-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[2OXOGLUTARATEDEH-RXN]]
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** Category: [[orthology]]
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* [[2OXOGLUTDECARB-RXN]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[3-SULFINOALANINE-AMINOTRANSFERASE-RXN]]
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* [[PROSTAGLANDIN-D-SYNTHASE-RXN]]
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* [[ACETYLORNTRANSAM-RXN]]
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** Category: [[annotation]]
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* [[AKGCITtm]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[AKGDHmi]]
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* [[RXN-13673]]
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* [[ALANINE-AMINOTRANSFERASE-RXN]]
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** Category: [[annotation]]
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* [[ASPAMINOTRANS-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[BRANCHED-CHAINAMINOTRANSFERILEU-RXN]]
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** Category: [[orthology]]
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* [[BRANCHED-CHAINAMINOTRANSFERLEU-RXN]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[BRANCHED-CHAINAMINOTRANSFERVAL-RXN]]
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* [[RXN-15680]]
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* [[CYSTEINE-AMINOTRANSFERASE-RXN]]
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** Category: [[annotation]]
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* [[D-ALANINE-AMINOTRANSFERASE-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[GABATRANSAM-RXN]]
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** Category: [[orthology]]
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* [[GLUTAMATE-DEHYDROGENASE-RXN]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[GLUTAMATE-SYNTHASE-FERREDOXIN-RXN]]
 
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* [[GLUTAMATE-SYNTHASE-NADH-RXN]]
 
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* [[GLUTAMATESYN-RXN]]
 
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* [[GLUTDEHYD-RXN]]
 
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* [[GLYCINE-AMINOTRANSFERASE-RXN]]
 
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* [[HISTAMINOTRANS-RXN]]
 
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* [[ISOCITDEH-RXN]]
 
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* [[KETOGLUTREDUCT-RXN]]
 
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* [[NARINGENIN-3-DIOXYGENASE-RXN]]
 
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* [[OAAAKGtm]]
 
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* [[ORNITHINE-GLU-AMINOTRANSFERASE-RXN]]
 
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* [[PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN]]
 
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* [[PHEAMINOTRANS-RXN]]
 
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* [[PREPHENATE-TRANSAMINE-RXN]]
 
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* [[PSERTRANSAM-RXN]]
 
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* [[PSERTRANSAMPYR-RXN]]
 
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* [[RXN-10721]]
 
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* [[RXN-10814]]
 
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* [[RXN-113]]
 
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* [[RXN-11320]]
 
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* [[RXN-11321]]
 
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* [[RXN-115]]
 
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* [[RXN-11737]]
 
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* [[RXN-12353]]
 
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* [[RXN-13186]]
 
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* [[RXN-13697]]
 
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* [[RXN-13698]]
 
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* [[RXN-14147]]
 
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* [[RXN-15007]]
 
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* [[RXN-16701]]
 
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* [[RXN-171]]
 
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* [[RXN-17811]]
 
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* [[RXN-2901]]
 
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* [[RXN-527]]
 
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* [[RXN-602]]
 
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* [[RXN-6550]]
 
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* [[RXN-7648]]
 
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* [[RXN-7737]]
 
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* [[RXN-7775]]
 
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* [[RXN-7922]]
 
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* [[RXN-8450]]
 
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* [[RXN-8642]]
 
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* [[RXN-8660]]
 
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* [[RXN-8661]]
 
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* [[RXN0-1863]]
 
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* [[RXN0-7090]]
 
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* [[RXN0-984]]
 
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* [[RXN0-985]]
 
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* [[RXN0-986]]
 
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* [[RXN1F-162]]
 
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* [[RXN1F-163]]
 
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* [[RXN1F-165]]
 
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* [[RXN1F-167]]
 
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* [[RXN1F-168]]
 
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* [[RXN1F-93]]
 
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* [[RXN490-3641]]
 
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* [[RXN66-470]]
 
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* [[SUCCINYLDIAMINOPIMTRANS-RXN]]
 
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* [[TRIMETHYLLYSINE-DIOXYGENASE-RXN]]
 
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* [[TRYPTOPHAN-AMINOTRANSFERASE-RXN]]
 
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* [[TYROSINE-AMINOTRANSFERASE-RXN]]
 
 
</div>
 
</div>
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== Reaction(s) known to produce the compound ==
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== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[PWY-6842]]
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* [[2-HYDROXYGLUTARATE-DEHYDROGENASE-RXN]]
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** '''5''' reactions found over '''9''' reactions in the full pathway
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* [[2.6.1.57-RXN]]
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* [[PWY-4061]]
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* [[2.6.1.7-RXN]]
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** '''4''' reactions found over '''8''' reactions in the full pathway
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* [[3-SULFINOALANINE-AMINOTRANSFERASE-RXN]]
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* [[PWY66-374]]
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* [[ACETYLORNTRANSAM-RXN]]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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* [[AKGCITtm]]
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* [[PWY-7112]]
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* [[ALANINE-AMINOTRANSFERASE-RXN]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[ASPAMINOTRANS-RXN]]
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* [[PWY-7533]]
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* [[BRANCHED-CHAINAMINOTRANSFERILEU-RXN]]
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** '''3''' reactions found over '''9''' reactions in the full pathway
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* [[BRANCHED-CHAINAMINOTRANSFERLEU-RXN]]
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{{#set: transcription-direction=negative}}
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* [[BRANCHED-CHAINAMINOTRANSFERVAL-RXN]]
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{{#set: right-end-position=77200}}
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* [[CYSTEINE-AMINOTRANSFERASE-RXN]]
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{{#set: left-end-position=72574}}
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* [[D-ALANINE-AMINOTRANSFERASE-RXN]]
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{{#set: centisome-position=53.514336    }}
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* [[GABATRANSAM-RXN]]
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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* [[GLUTAMATE-DEHYDROGENASE-RXN]]
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{{#set: nb reaction associated=5}}
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* [[GLUTDEHYD-RXN]]
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{{#set: nb pathway associated=5}}
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* [[GLYCINE-AMINOTRANSFERASE-RXN]]
 
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* [[HISTAMINOTRANS-RXN]]
 
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* [[ISOCITDEH-RXN]]
 
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* [[KETOGLUTREDUCT-RXN]]
 
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* [[OAAAKGtm]]
 
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* [[ORNITHINE-GLU-AMINOTRANSFERASE-RXN]]
 
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* [[PHEAMINOTRANS-RXN]]
 
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* [[PREPHENATE-TRANSAMINE-RXN]]
 
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* [[PSERTRANSAM-RXN]]
 
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* [[PSERTRANSAMPYR-RXN]]
 
−
* [[RXN-10721]]
 
−
* [[RXN-10814]]
 
−
* [[RXN-11737]]
 
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* [[RXN-12878]]
 
−
* [[RXN-13697]]
 
−
* [[RXN-13698]]
 
−
* [[RXN-14147]]
 
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* [[RXN-14932]]
 
−
* [[RXN-15007]]
 
−
* [[RXN-16701]]
 
−
* [[RXN-17811]]
 
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* [[RXN-2901]]
 
−
* [[RXN-7737]]
 
−
* [[RXN-8642]]
 
−
* [[RXN0-1863]]
 
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* [[SUCCINYLDIAMINOPIMTRANS-RXN]]
 
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* [[TRYPTOPHAN-AMINOTRANSFERASE-RXN]]
 
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* [[TYROSINE-AMINOTRANSFERASE-RXN]]
 
−
</div>
 
−
== Reaction(s) of unknown directionality ==
 
−
{{#set: common-name=2-oxoglutarate}}
 
−
{{#set: inchi-key=inchikey=kpgxrsrhynqifn-uhfffaoysa-l}}
 
−
{{#set: molecular-weight=144.084}}
 

Latest revision as of 11:02, 18 March 2021

Gene SJ02439

  • transcription-direction:
    • negative
  • right-end-position:
    • 77200
  • left-end-position:
    • 72574
  • centisome-position:
    • 53.514336

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6842
    • 5 reactions found over 9 reactions in the full pathway
  • PWY-4061
    • 4 reactions found over 8 reactions in the full pathway
  • PWY66-374
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-7112
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7533
    • 3 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ02439&oldid=132564"