Difference between revisions of "SJ02470"

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(Created page with "Category:gene == Gene SJ15410 == * transcription-direction: ** positive * right-end-position: ** 266676 * left-end-position: ** 262574 * centisome-position: ** 88.59848...")
(Created page with "Category:gene == Gene SJ02470 == * transcription-direction: ** negative * right-end-position: ** 101859 * left-end-position: ** 67710 * centisome-position: ** 50.186413...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ15410 ==
+
== Gene SJ02470 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 266676
+
** 101859
 
* left-end-position:
 
* left-end-position:
−
** 262574
+
** 67710
 
* centisome-position:
 
* centisome-position:
−
** 88.59848    
+
** 50.186413    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[GPPSYN-RXN]]
+
* [[2.7.1.148-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-4303]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-4305]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN0-6274]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[NONMEVIPP-PWY]]
−
* [[PWY-6383]]
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY-7560]]
−
* [[PWY-7410]]
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
{{#set: transcription-direction=negative}}
−
* [[PWY-7102]]
+
{{#set: right-end-position=101859}}
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
{{#set: left-end-position=67710}}
−
* [[PWY-6859]]
+
{{#set: centisome-position=50.186413   }}
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7736]]
 
−
** '''3''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5122]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-7141]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-7659]]
 
−
** '''1''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-7709]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-5123]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7182]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-2681]]
 
−
** '''4''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-2781]]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=266676}}
 
−
{{#set: left-end-position=262574}}
 
−
{{#set: centisome-position=88.59848   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=13}}
+
{{#set: nb pathway associated=2}}

Latest revision as of 11:08, 18 March 2021

Gene SJ02470

  • transcription-direction:
    • negative
  • right-end-position:
    • 101859
  • left-end-position:
    • 67710
  • centisome-position:
    • 50.186413

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • NONMEVIPP-PWY
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-7560
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ02470&oldid=135318"