Difference between revisions of "SJ02470"

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(Created page with "Category:gene == Gene SJ02910 == * transcription-direction: ** positive * right-end-position: ** 195815 * left-end-position: ** 180581 * centisome-position: ** 34.00202...")
(Created page with "Category:gene == Gene SJ02470 == * transcription-direction: ** negative * right-end-position: ** 101859 * left-end-position: ** 67710 * centisome-position: ** 50.186413...")
 
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ02910 ==
+
== Gene SJ02470 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 195815
+
** 101859
 
* left-end-position:
 
* left-end-position:
** 180581
+
** 67710
 
* centisome-position:
 
* centisome-position:
** 34.00202    
+
** 50.186413    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[2.7.1.148-RXN]]
* [[2.7.8.15-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[2.7.8.17-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[PHOSNACMURPENTATRANS-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN-11347]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN-8975]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]]
+
* [[NONMEVIPP-PWY]]
** '''16''' reactions found over '''19''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
* [[PEPTIDOGLYCANSYN-PWY]]
+
* [[PWY-7560]]
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
* [[PWY-6470]]
+
{{#set: transcription-direction=negative}}
** '''2''' reactions found over '''9''' reactions in the full pathway
+
{{#set: right-end-position=101859}}
* [[PWY-6471]]
+
{{#set: left-end-position=67710}}
** '''2''' reactions found over '''6''' reactions in the full pathway
+
{{#set: centisome-position=50.186413   }}
* [[PWY-5265]]
 
** '''2''' reactions found over '''6''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=195815}}
 
{{#set: left-end-position=180581}}
 
{{#set: centisome-position=34.00202   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=2}}

Latest revision as of 11:08, 18 March 2021

Gene SJ02470

  • transcription-direction:
    • negative
  • right-end-position:
    • 101859
  • left-end-position:
    • 67710
  • centisome-position:
    • 50.186413

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • NONMEVIPP-PWY
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-7560
    • 9 reactions found over 9 reactions in the full pathway