Difference between revisions of "SJ02485"
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(Created page with "Category:gene == Gene SJ02966 == == Organism(s) associated with this gene == * S.japonica_sterols_curated == Reaction(s) associated == * 4.2.2.10-RXN ** Category:...") |
(Created page with "Category:gene == Gene SJ13518 == * transcription-direction: ** negative * right-end-position: ** 118248 * left-end-position: ** 102501 * centisome-position: ** 30.633984...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ13518 == |
| + | * transcription-direction: | ||
| + | ** negative | ||
| + | * right-end-position: | ||
| + | ** 118248 | ||
| + | * left-end-position: | ||
| + | ** 102501 | ||
| + | * centisome-position: | ||
| + | ** 30.633984 | ||
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
| − | * [[S. | + | * [[S.japonica_carotenoid_curated]] |
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[4 | + | * [[4-NITROPHENYLPHOSPHATASE-RXN]] |
| − | ** Category: [[ | + | ** Category: [[annotation]] |
| − | *** source: [[ | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
| − | * [[RXN | + | * [[F16BDEPHOS-RXN]] |
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[SUGAR-PHOSPHATASE-RXN]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[P185-PWY]] |
| − | ** ''' | + | ** '''11''' reactions found over '''12''' reactions in the full pathway |
| − | {{#set: organism associated=S. | + | * [[PWY66-399]] |
| − | {{#set: nb reaction associated= | + | ** '''11''' reactions found over '''12''' reactions in the full pathway |
| − | {{#set: nb pathway associated= | + | * [[SUCSYN-PWY]] |
| + | ** '''6''' reactions found over '''7''' reactions in the full pathway | ||
| + | * [[CALVIN-PWY]] | ||
| + | ** '''12''' reactions found over '''13''' reactions in the full pathway | ||
| + | * [[GLUCONEO-PWY]] | ||
| + | ** '''12''' reactions found over '''13''' reactions in the full pathway | ||
| + | * [[PWY-5484]] | ||
| + | ** '''10''' reactions found over '''11''' reactions in the full pathway | ||
| + | * [[GLYCOLYSIS]] | ||
| + | ** '''11''' reactions found over '''12''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=118248}} | ||
| + | {{#set: left-end-position=102501}} | ||
| + | {{#set: centisome-position=30.633984 }} | ||
| + | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| + | {{#set: nb reaction associated=3}} | ||
| + | {{#set: nb pathway associated=7}} | ||
Revision as of 14:44, 5 January 2021
Contents
Gene SJ13518
- transcription-direction:
- negative
- right-end-position:
- 118248
- left-end-position:
- 102501
- centisome-position:
- 30.633984
Organism(s) associated with this gene
Reaction(s) associated
- 4-NITROPHENYLPHOSPHATASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- F16BDEPHOS-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- SUGAR-PHOSPHATASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- P185-PWY
- 11 reactions found over 12 reactions in the full pathway
- PWY66-399
- 11 reactions found over 12 reactions in the full pathway
- SUCSYN-PWY
- 6 reactions found over 7 reactions in the full pathway
- CALVIN-PWY
- 12 reactions found over 13 reactions in the full pathway
- GLUCONEO-PWY
- 12 reactions found over 13 reactions in the full pathway
- PWY-5484
- 10 reactions found over 11 reactions in the full pathway
- GLYCOLYSIS
- 11 reactions found over 12 reactions in the full pathway
