Difference between revisions of "SJ02709"
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(Created page with "Category:gene == Gene SJ13415 == * transcription-direction: ** negative * right-end-position: ** 135017 * left-end-position: ** 130738 * centisome-position: ** 38.81689...") |
(Created page with "Category:gene == Gene SJ10377 == * transcription-direction: ** negative * right-end-position: ** 726933 * left-end-position: ** 709554 * centisome-position: ** 87.70407...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ10377 == |
* transcription-direction: | * transcription-direction: | ||
** negative | ** negative | ||
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 726933 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 709554 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 87.70407 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
| − | * [[S. | + | * [[S.japonica_carotenoid_curated]] |
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[ARGSUCCINSYN-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[RXN-10]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-7400]] |
** '''7''' reactions found over '''9''' reactions in the full pathway | ** '''7''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY-4984]] | ||
| + | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[ARGSYN-PWY]] | ||
| + | ** '''5''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[ARGSYNBSUB-PWY]] | ||
| + | ** '''9''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY-4983]] | ||
| + | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[PWY-5154]] | ||
| + | ** '''8''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY-5]] | ||
| + | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
{{#set: transcription-direction=negative}} | {{#set: transcription-direction=negative}} | ||
| − | {{#set: right-end-position= | + | {{#set: right-end-position=726933}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=709554}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=87.70407 }} |
| − | {{#set: organism associated=S. | + | {{#set: organism associated=S.japonica_carotenoid_curated}} |
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=2}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=7}} |
Revision as of 14:50, 5 January 2021
Contents
Gene SJ10377
- transcription-direction:
- negative
- right-end-position:
- 726933
- left-end-position:
- 709554
- centisome-position:
- 87.70407
Organism(s) associated with this gene
Reaction(s) associated
- ARGSUCCINSYN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-10
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7400
- 7 reactions found over 9 reactions in the full pathway
- PWY-4984
- 5 reactions found over 5 reactions in the full pathway
- ARGSYN-PWY
- 5 reactions found over 4 reactions in the full pathway
- ARGSYNBSUB-PWY
- 9 reactions found over 9 reactions in the full pathway
- PWY-4983
- 3 reactions found over 3 reactions in the full pathway
- PWY-5154
- 8 reactions found over 9 reactions in the full pathway
- PWY-5
- 3 reactions found over 4 reactions in the full pathway
